WormBase Tree Display for Variation: WBVar01602918
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WBVar01602918 | Name | Public_name | WBVar01602918 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00278433 | |||||||
Y54E10A.4c.1:c.370-166A>T | ||||||||
Y54E10A.4b.1:c.1177-166A>T | ||||||||
Y54E10A.4a.2:c.535-166A>T | ||||||||
Y54E10A.4a.1:c.535-166A>T | ||||||||
HGVSg | CHROMOSOME_I:g.3215147A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54E10A | ||||
Flanking_sequences | ATCTACGAATTTTTTGTCCAAAAATGCGTG | CGTCAGCACGTTCTGAACCATAGAGCTACA | ||||||
Mapping_target | Y54E10A | |||||||
Source_location | 225 | CHROMOSOME_I | 3215149 | 3215149 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001481 | ||||||
Transcript | Y54E10A.4a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54E10A.4a.1:c.535-166A>T | |||||||
Intron_number | 8/10 | |||||||
Y54E10A.4c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54E10A.4c.1:c.370-166A>T | |||||||
Intron_number | 2/3 | |||||||
Y54E10A.4b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54E10A.4b.1:c.1177-166A>T | |||||||
Intron_number | 8/9 | |||||||
Y54E10A.4a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54E10A.4a.2:c.535-166A>T | |||||||
Intron_number | 4/6 | |||||||
Method | WGS_Flibotte |