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WormBase Tree Display for Variation: WBVar01602917

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Name Class

WBVar01602917NamePublic_nameWBVar01602917
Other_namecewivar00278432
Y54E10A.4b.1:c.1176+27C>A
Y54E10A.4a.1:c.534+27C>A
Y54E10A.4c.1:c.369+27C>A
Y54E10A.4a.2:c.534+27C>A
HGVSgCHROMOSOME_I:g.3214338C>A
Sequence_detailsSMapS_parentSequenceY54E10A
Flanking_sequencesGACGGTTAGTTACTCAAAATGCCTCTTTTTATTTAAAAAATATCGAAAAAATGACCTGAT
Mapping_targetY54E10A
Source_location225CHROMOSOME_I32143403214340From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00001481
TranscriptY54E10A.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.4a.1:c.534+27C>A
Intron_number8/10
Y54E10A.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.4c.1:c.369+27C>A
Intron_number2/3
Y54E10A.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.4b.1:c.1176+27C>A
Intron_number8/9
Y54E10A.4a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.4a.2:c.534+27C>A
Intron_number4/6
MethodWGS_Flibotte