WormBase Tree Display for Variation: WBVar01391830

WBVar01391830 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01391830
    Other_name: cewivar00664299
      Y54E10A.4b.1:c.514+549del
      Y54E10A.4a.1:c.-129+549del
    HGVSg: CHROMOSOME_I:g.3212282del
  Sequence_details: SMap: S_parent: Sequence: Y54E10A
    Flanking_sequences: CTCGATTTTTAAAATCTCATGTTTTTTTACGATTGTTTTGTTGTTTTTAA TTTTTTTTTTTTTTTGAGTAAATGTTAATTTTTTCGTCGCATTTCCTTAC
    Mapping_target: Y54E10A
    Type_of_mutation: Deletion: T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004599 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00027647 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539111442
    Status: Live
  Affects: Gene: WBGene00001481
    Transcript: Y54E10A.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E10A.4a.1:c.-129+549del
        Intron_number: 4/10
      Y54E10A.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E10A.4b.1:c.514+549del
        Intron_number: 5/9
  Reference: WBPaper00037807
  Method: WGS_De_Bono