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WormBase Tree Display for Gene: WBGene00016061

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Name Class

WBGene00016061SMapS_parentSequenceC24G6
IdentityVersion2
NameCGC_namehpo-15Paper_evidenceWBPaper00038231
Person_evidenceWBPerson26
Sequence_nameC24G6.6
Molecular_nameC24G6.6
C24G6.6.1
CE17462
C24G6.6.2
C24G6.6.3
Other_nameCELE_C24G6.6Accession_evidenceNDBBX284605
Public_namehpo-15
DB_infoDatabaseAceViewgene5F990
WormQTLgeneWBGene00016061
WormFluxgeneWBGene00016061
NDBlocus_tagCELE_C24G6.6
PanthergeneCAEEL|WormBase=WBGene00016061|UniProtKB=O76383
familyPTHR10742
NCBIgene178934
RefSeqproteinNM_072055.8
TREEFAMTREEFAM_IDTF318348
TrEMBLUniProtAccO76383
UniProt_GCRPUniProtAccO76383
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
226 Apr 2011 13:31:47WBPerson2970Name_changeCGC_namehpo-15
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhpo
Allele (56)
RNASeq_FPKM (74)
GO_annotation00038296
00038297
00121742
Ortholog (45)
ParalogWBGene00000139Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000137Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000138Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00005010Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011615Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019154Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable polyamine oxidase activity. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma. Is an ortholog of human PAOX (polyamine oxidase) and SMOX (spermine oxidase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:3908Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:20837)
Molecular_infoCorresponding_CDSC24G6.6
Corresponding_transcriptC24G6.6.1
C24G6.6.2
C24G6.6.3
Other_sequence (27)
Associated_featureWBsf652630
WBsf652631
WBsf652632
WBsf233684
Experimental_infoRNAi_resultWBRNAi00091508Inferred_automaticallyRNAi_primary
WBRNAi00088739Inferred_automaticallyRNAi_primary
WBRNAi00029153Inferred_automaticallyRNAi_primary
WBRNAi00011120Inferred_automaticallyRNAi_primary
WBRNAi00088632Inferred_automaticallyRNAi_primary
WBRNAi00041103Inferred_automaticallyRNAi_primary
WBRNAi00085294Inferred_automaticallyRNAi_primary
WBRNAi00066615Inferred_automaticallyRNAi_primary
Expr_patternExpr1020560
Expr1036862
Expr1145138
Expr2012559
Expr2030796
Drives_constructWBCnstr00028352
Construct_productWBCnstr00028352
Microarray_results (23)
Expression_clusterWBPaper00030922:glycosylated_protein
WBPaper00032031:DConiospora_downregulated_OligoArray_24h
WBPaper00032425:down_in_zfp-1
WBPaper00033065:clk-1(qm30)_upregulated
WBPaper00034761:hlh-30_downregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_embryo_enriched
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
WBPaper00042477:rsr-2(RNAi)_downregulated_RNAseq
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:somatic_specific
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045314:S.aureus-induced_hlh-30(tm1978)
WBPaper00045314:S.aureus-induced_N2
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00045934:wrn-1(gk99)_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00047132:skn-1(RNAi)_downregulated
WBPaper00048657:plep-1(ttTi53821)_regulated
WBPaper00048988:neuron_expressed
WBPaper00049018:ham-3(RNAi)_downregulated
WBPaper00049368:daf-2(e1370)_downregulated
WBPaper00049484:elt-2(RNAi)_downregulated_L4
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049736:15deg-then-25deg(12hr)_upregulated_N2
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_downregulated_N2
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049954:BPA_downregulated
WBPaper00050080:rbr-2(tm3141)_upregulated
WBPaper00050094:mes-6(bn66)_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050332:daf-16(RNAi)_downregulated
WBPaper00050468:hlh-30-dependent_Cry5B_regulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050903:mir-35-41(nDf50)_25C_upregulated
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:ash-2(RNAi)_regulated_germline
WBPaper00051039:intestine_enriched
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051305:vit-2(ac3)_downregulated
WBPaper00051388:Glucose-diet_downregulated
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00051404:alg-2(ok304)_downregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053154:human-amyloid-beta_tau_regulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053308:NMD(-)_upregulated_SMD-2_non-binding_ClassIII
WBPaper00053321:mes-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:mes-4(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053798:nhr-49(nr2041)_tBOOH_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053814:15C_downregulated_PY79
WBPaper00053814:25C_upregulated_OP50
WBPaper00053814:OP50_vs_PY79_downregulated_PY79
WBPaper00054758:alg-1(gk204)_downregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055482:Tunicamycin_upregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056139:gut-microbiota_upregulated
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056826:hmc_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:set-2(bn129)_downregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059253:sucrose_downregulated
WBPaper00059253:sucrose_stearic-acid_downregulated
WBPaper00059604:fluvastatin_upregulated_dlk-1(km12)
WBPaper00059604:fluvastatin_upregulated_N2
WBPaper00059735:glucose_downregulated_lpin-1(RNAi)
WBPaper00059735:glucose_downregulated_N2
WBPaper00059739:hira-1(gk835598)_downregulated_adult
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00059839:S.maltophilia_regulated
WBPaper00059987:Wounding_downregulated
WBPaper00060084:cco-1(RNAi)_downregulated_lin-40(yth27)
WBPaper00060273:isp-1(qm150)_downregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_N2
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060683:hlh-11(overexpression)_downregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061007:M.braciatum_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061007:X.citri_upregulated
WBPaper00061045:Y56A3A.22(cck200)_upregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061274:hypergravity_10xg_downregulated
WBPaper00061274:hypergravity_15xg_downregulated
WBPaper00061340:Intestine
WBPaper00061341:28C_24h_upregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061527:F35C8.5-T10B5.7
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00061800:miR-85(n4117)_downregulated_20C
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062197:mec-8_upregulated_TRN
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062440:crh-1(syb385)_downregulated
WBPaper00062456:doxycycline_downregulated_CB4856_protein
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064315:mes-3(bn199)_upregulated_EGCs
WBPaper00064315:mes-3(bn199)_upregulated_PGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_PGCs
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064716:paraquat_downregulated
WBPaper00064727:daf-2(e1370)_upregulated
WBPaper00064871:hypoxia_downregulated_F3
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:JU1400_N.ironsii_regulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065373:sek-1(km4)_upregulated_Ref
WBPaper00065749:endu-2(tm4977)_upregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
WBPaper00065841:18_0
WBPaper00065841:78_0
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00065995:M.humicola-extract_upregulated_N2
WBPaper00066085:sin-3(syb2172)_upregulated
WBPaper00066085:sin-3(tm1276)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4386_cluster_1_1
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00027111:rrf-1(pk1417)_upregulated
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_4
WBPaper00032948:StarveUp3
WBPaper00033101:spr-5_regulated
WBPaper00034757:up_by_oxidative_stress
WBPaper00035227:heat_shock_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-11_regulated
WBPaper00035873:osmotically_regulated
WBPaper00036286:Pattern_I
WBPaper00037695:LD_3-day
WBPaper00037695:WC_5-day
WBPaper00038172:crh-1null_down_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040876:mir-35_downregulated
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041174:environmental
WBPaper00041174:environmental_prime
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042128:gei-8(ok1671)_upregulated
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00055899:nitroguanidine_regulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5976]:class_2
[cgc6390]:herm_soma-enriched
Interaction (138)
Map_infoMapVPosition-1.74087Error0.007229
PositivePositive_cloneC24G6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00030371
WBPaper00038491
WBPaper00055090
WBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene