WormBase Tree Display for Gene: WBGene00000137
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| WBGene00000137 | Evidence | Person_evidence | WBPerson508 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R13G10 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | amx-1 | Person_evidence | WBPerson508 | |||||
| Sequence_name | R13G10.2 | ||||||||
| Molecular_name | R13G10.2 | ||||||||
| R13G10.2.1 | |||||||||
| CE41445 | |||||||||
| Other_name | CELE_R13G10.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | amx-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | amx | ||||||||
| Allele (54) | |||||||||
| Strain | WBStrain00031547 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00011615 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00005010 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000138 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000139 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016061 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019154 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enables FAD-dependent H3K4me/H3K4me3 demethylase activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in chemosensory neurons. Human ortholog(s) of this gene implicated in retinoblastoma. Is an ortholog of human KDM1B (lysine demethylase 1B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:768 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21577) | ||||
| Molecular_info | Corresponding_CDS | R13G10.2 | |||||||
| Corresponding_CDS_history | R13G10.2:wp179 | ||||||||
| Corresponding_transcript | R13G10.2.1 | ||||||||
| Other_sequence | CRC05871_1 | ||||||||
| Dviv_isotig17066 | |||||||||
| CR04179 | |||||||||
| ACC06450_1 | |||||||||
| Dviv_isotig17067 | |||||||||
| Dviv_isotig23595 | |||||||||
| Associated_feature | WBsf654931 | ||||||||
| WBsf658771 | |||||||||
| WBsf991917 | |||||||||
| WBsf991918 | |||||||||
| WBsf991919 | |||||||||
| WBsf1014644 | |||||||||
| WBsf1014645 | |||||||||
| WBsf224654 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr13206 | ||||||||
| Expr1027553 | |||||||||
| Expr1030070 | |||||||||
| Expr1155579 | |||||||||
| Expr2009329 | |||||||||
| Expr2027565 | |||||||||
| Drives_construct | WBCnstr00037710 | ||||||||
| WBCnstr00038871 | |||||||||
| Construct_product | WBCnstr00037710 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | III | Position | -4.24961 | Error | 0.000432 | |||
| Positive | Positive_clone | R13G10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4155 | |||||||
| Pseudo_map_position | |||||||||
| Reference (19) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
