Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00016061

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00016061SMapS_parentSequenceC24G6
IdentityVersion2
NameCGC_namehpo-15Paper_evidenceWBPaper00038231
Person_evidenceWBPerson26
Sequence_nameC24G6.6
Molecular_nameC24G6.6
C24G6.6.1
CE17462
C24G6.6.2
C24G6.6.3
Other_nameCELE_C24G6.6Accession_evidenceNDBBX284605
Public_namehpo-15
DB_infoDatabaseAceViewgene5F990
WormQTLgeneWBGene00016061
WormFluxgeneWBGene00016061
NDBlocus_tagCELE_C24G6.6
PanthergeneCAEEL|WormBase=WBGene00016061|UniProtKB=O76383
familyPTHR10742
NCBIgene178934
RefSeqproteinNM_072055.8
TREEFAMTREEFAM_IDTF318348
TrEMBLUniProtAccO76383
UniProt_GCRPUniProtAccO76383
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
226 Apr 2011 13:31:47WBPerson2970Name_changeCGC_namehpo-15
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhpo
Allele (56)
RNASeq_FPKM (74)
GO_annotation00038110
00121533
Ortholog (45)
ParalogWBGene00000139Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000137Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000138Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00005010Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011615Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019154Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable polyamine oxidase activity. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma. Is an ortholog of human PAOX (polyamine oxidase) and SMOX (spermine oxidase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Disease_infoPotential_modelDOID:3908Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:20837)
Molecular_infoCorresponding_CDSC24G6.6
Corresponding_transcriptC24G6.6.1
C24G6.6.2
C24G6.6.3
Other_sequence (27)
Associated_featureWBsf652630
WBsf652631
WBsf652632
WBsf233684
Experimental_infoRNAi_resultWBRNAi00091508Inferred_automaticallyRNAi_primary
WBRNAi00088739Inferred_automaticallyRNAi_primary
WBRNAi00029153Inferred_automaticallyRNAi_primary
WBRNAi00011120Inferred_automaticallyRNAi_primary
WBRNAi00088632Inferred_automaticallyRNAi_primary
WBRNAi00041103Inferred_automaticallyRNAi_primary
WBRNAi00085294Inferred_automaticallyRNAi_primary
WBRNAi00066615Inferred_automaticallyRNAi_primary
Expr_patternExpr1020560
Expr1036862
Expr1145138
Expr2012559
Expr2030796
Drives_constructWBCnstr00028352
Construct_productWBCnstr00028352
Microarray_results (23)
Expression_cluster (238)
Interaction (138)
Map_infoMapVPosition-1.74087Error0.007229
PositivePositive_cloneC24G6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00030371
WBPaper00038491
WBPaper00055090
WBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene