WormBase Tree Display for Gene: WBGene00000137

WBGene00000137 Evidence: Person_evidence: WBPerson508
  SMap: S_parent: Sequence: R13G10
  Identity: Version: 1
    Name: CGC_name: amx-1 Person_evidence: WBPerson508
      Sequence_name: R13G10.2
      Molecular_name: R13G10.2
        R13G10.2.1
        CE41445
      Other_name: CELE_R13G10.2 Accession_evidence: NDB BX284603
      Public_name: amx-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: amx
    Allele (54)
    Strain: WBStrain00031547
    RNASeq_FPKM (74)
    GO_annotation (14)
    Ortholog: WBGene00071101 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00039201 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00134238 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00193490 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00100018 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00225646 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g3931 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g8080 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g20805 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1790 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g1792 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g16835 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22416 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g22418 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g10333 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4072 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g24103 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g4798 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g7936 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22045 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g22046 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_11026.g23002 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-amx-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_04201.g32335 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11370 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_011195 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13245 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g22902 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30320000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7321 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00081647 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00239943 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00263750 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00293908 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000004622 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Inparanoid
            Panther
      FB:FBgn0260397 Drosophila melanogaster From_analysis: Inparanoid
            OMA
            OrthoFinder
      ZFIN:ZDB-GENE-030131-7828 Danio rerio From_analysis: Inparanoid
            OMA
            OrthoFinder
      HGNC:21577 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2145261 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1310701 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00011615 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00005010 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000138 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000139 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016061 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019154 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enables FAD-dependent H3K4me/H3K4me3 demethylase activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in chemosensory neurons. Human ortholog(s) of this gene implicated in retinoblastoma. Is an ortholog of human KDM1B (lysine demethylase 1B). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:768 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:21577)
  Molecular_info: Corresponding_CDS: R13G10.2
    Corresponding_CDS_history: R13G10.2:wp179
    Corresponding_transcript: R13G10.2.1
    Other_sequence: CRC05871_1
      Dviv_isotig17066
      CR04179
      ACC06450_1
      Dviv_isotig17067
      Dviv_isotig23595
    Associated_feature: WBsf654931
      WBsf658771
      WBsf991917
      WBsf991918
      WBsf991919
      WBsf1014644
      WBsf1014645
      WBsf224654
  Experimental_info: RNAi_result (13)
    Expr_pattern: Expr13206
      Expr1027553
      Expr1030070
      Expr1155579
      Expr2009329
      Expr2027565
    Drives_construct: WBCnstr00037710
      WBCnstr00038871
    Construct_product: WBCnstr00037710
    Microarray_results (22)
    Expression_cluster (123)
    Interaction (17)
  Map_info: Map: III Position: -4.24961 Error: 0.000432
    Positive: Positive_clone: R13G10 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4155
    Pseudo_map_position
  Reference (19)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene