WormBase Tree Display for Gene: WBGene00004922

WBGene00004922 Evidence: Person_evidence: WBPerson508
  SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 2
    Name: CGC_name: snt-2 Person_evidence: WBPerson508
      Sequence_name: F42G9.7
      Molecular_name: F42G9.7
        F42G9.7.1
        CE37915
      Other_name: CELE_F42G9.7 Accession_evidence: NDB BX284603
      Public_name: snt-2
    DB_info: Database: AceView gene 3B404
        WormQTL gene WBGene00004922
        WormFlux gene WBGene00004922
        NDB locus_tag CELE_F42G9.7
        Panther gene CAEEL|WormBase=WBGene00004922|UniProtKB=K8FE10
          family PTHR10024
        NCBI gene 185680
        RefSeq protein NM_064860.6
        SwissProt UniProtAcc K8FE10
        UniProt_GCRP UniProtAcc K8FE10
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 20 Oct 2005 08:55:16 WBPerson1867 Event: Acquires_merge: WBGene00015174
      Acquires_merge: WBGene00015174
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: snt
    Allele (159)
    RNASeq_FPKM (74)
    GO_annotation (20)
    Ortholog (48)
    Paralog: WBGene00004921 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004923 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004924 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004926 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011682 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004925 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004316 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006306 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00020861 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable several functions, including calcium ion binding activity; phospholipid binding activity; and syntaxin binding activity. Predicted to be involved in cellular response to calcium ion; regulation of secretion by cell; and synaptic vesicle cycle. Located in dense core granule. Expressed in head neurons; intestine; and tail neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F42G9.7
    Corresponding_CDS_history: F42G9.7:wp137
    Corresponding_transcript: F42G9.7.1
    Other_sequence (19)
    Associated_feature: WBsf650817
      WBsf666444
      WBsf666540
      WBsf991158
      WBsf991159
      WBsf1014135
  Experimental_info: RNAi_result: WBRNAi00039036 Inferred_automatically: RNAi_primary
      WBRNAi00112394 Inferred_automatically: RNAi_primary
      WBRNAi00039035 Inferred_automatically: RNAi_primary
      WBRNAi00002650 Inferred_automatically: RNAi_primary
      WBRNAi00006729 Inferred_automatically: RNAi_primary
      WBRNAi00047137 Inferred_automatically: RNAi_primary
      WBRNAi00032160 Inferred_automatically: RNAi_primary
      WBRNAi00014854 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr10801
      Expr1019787
      Expr1032451
      Expr1151005
      Expr2015977
      Expr2034212
    Drives_construct: WBCnstr00017740
      WBCnstr00035320
    Construct_product: WBCnstr00035320
    Microarray_results (27)
    Expression_cluster (106)
    Interaction: WBInteraction000520044
      WBInteraction000548047
  Map_info: Map: III Position: -26.0124 Error: 0.026073
    Positive: Positive_clone: F42G9 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4612
        5047
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00042242
    WBPaper00042472
    WBPaper00055090
    WBPaper00061401
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene