WormBase Tree Display for Gene: WBGene00006306
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WBGene00006306 | SMap | S_parent | Sequence | F07A5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | sue-1 | Person_evidence | WBPerson769 | |||||
Sequence_name | F07A5.5 | ||||||||
Molecular_name | F07A5.5 | ||||||||
F07A5.5.1 | |||||||||
CE42451 | |||||||||
Other_name | CELE_F07A5.5 | Accession_evidence | NDB | BX284601 | |||||
Public_name | sue-1 | ||||||||
DB_info | Database | AceView | gene | 1H940 | |||||
WormQTL | gene | WBGene00006306 | |||||||
WormFlux | gene | WBGene00006306 | |||||||
NDB | locus_tag | CELE_F07A5.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006306|UniProtKB=Q19136 | |||||||
family | PTHR10024 | ||||||||
NCBI | gene | 184108 | |||||||
RefSeq | protein | NM_059682.6 | |||||||
TREEFAM | TREEFAM_ID | TF315525 | |||||||
TrEMBL | UniProtAcc | Q19136 | |||||||
UniProt_GCRP | UniProtAcc | Q19136 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 25 Feb 2008 10:19:36 | WBPerson2970 | Event | Acquires_merge | WBGene00008544 | ||||
Acquires_merge | WBGene00008544 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sue | ||||||||
Allele (120) | |||||||||
Strain | WBStrain00047460 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (32) | |||||||||
Paralog | WBGene00004316 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00004921 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00004922 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00004923 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00004924 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00004925 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00004926 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00011682 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00020861 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable several functions, including calcium ion binding activity; phospholipid binding activity; and syntaxin binding activity. Predicted to be involved in calcium-ion regulated exocytosis; cellular response to calcium ion; and regulation of secretion by cell. Predicted to be located in exocytic vesicle and plasma membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F07A5.5 | |||||||
Corresponding_CDS_history | F07A5.5:wp188 | ||||||||
Corresponding_transcript | F07A5.5.1 | ||||||||
Other_sequence (23) | |||||||||
Associated_feature (16) | |||||||||
Experimental_info | RNAi_result | WBRNAi00003332 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043851 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00003331 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030591 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043852 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016302 | ||||||||
Expr1032547 | |||||||||
Expr1147827 | |||||||||
Expr2017107 | |||||||||
Expr2035243 | |||||||||
Drives_construct | WBCnstr00034404 | ||||||||
Construct_product | WBCnstr00034404 | ||||||||
Microarray_results (30) | |||||||||
Expression_cluster (177) | |||||||||
Interaction | WBInteraction000127028 | ||||||||
WBInteraction000212195 | |||||||||
WBInteraction000381630 | |||||||||
WBInteraction000411563 | |||||||||
WBInteraction000459446 | |||||||||
Map_info | Map | I | Position | 1.97928 | Error | 0.018956 | |||
Positive | Positive_clone | F07A5 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4710 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00017678 | ||||||||
WBPaper00017943 | |||||||||
Remark | Not to be confused with sus-1, a different gene [020812 krb] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |