WormBase Tree Display for Gene: WBGene00011682
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| WBGene00011682 | SMap | S_parent | Sequence | T10B10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | snt-7 | Person_evidence | WBPerson508 | |||||
| Sequence_name | T10B10.5 | ||||||||
| Molecular_name | T10B10.5 | ||||||||
| T10B10.5.1 | |||||||||
| CE41018 | |||||||||
| Other_name | CELE_T10B10.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | snt-7 | ||||||||
| DB_info | Database | AceView | gene | XP814 | |||||
| WormQTL | gene | WBGene00011682 | |||||||
| WormFlux | gene | WBGene00011682 | |||||||
| NDB | locus_tag | CELE_T10B10.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011682|UniProtKB=Q22372 | |||||||
| family | PTHR10024 | ||||||||
| NCBI | gene | 181615 | |||||||
| RefSeq | protein | NM_078125.6 | |||||||
| TrEMBL | UniProtAcc | Q22372 | |||||||
| UniProt_GCRP | UniProtAcc | Q22372 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 24 Jun 2009 10:25:59 | WBPerson9133 | Name_change | CGC_name | snt-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | snt | ||||||||
| Allele (52) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00004921 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004922 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004923 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004924 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004925 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004926 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004316 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006306 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020861 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable several functions, including SNARE binding activity; calcium ion binding activity; and phospholipid binding activity. Predicted to be involved in calcium-ion regulated exocytosis; cellular response to calcium ion; and regulation of secretion by cell. Predicted to be located in exocytic vesicle and plasma membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T10B10.5 | |||||||
| Corresponding_CDS_history | T10B10.5:wp57 | ||||||||
| T10B10.5:wp83 | |||||||||
| T10B10.5:wp175 | |||||||||
| Corresponding_transcript | T10B10.5.1 | ||||||||
| Other_sequence | Dviv_isotig29569 | ||||||||
| Oden_isotig21278 | |||||||||
| JI172269.1 | |||||||||
| Associated_feature | WBsf1008128 | ||||||||
| WBsf1008129 | |||||||||
| WBsf1008130 | |||||||||
| WBsf1008131 | |||||||||
| WBsf1008132 | |||||||||
| WBsf1024534 | |||||||||
| WBsf1024535 | |||||||||
| WBsf238307 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052989 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000232 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112400 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011112 | ||||||||
| Expr1156592 | |||||||||
| Expr2015982 | |||||||||
| Expr2034217 | |||||||||
| Drives_construct | WBCnstr00030471 | ||||||||
| Construct_product | WBCnstr00030471 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (109) | |||||||||
| Interaction | WBInteraction000281053 | ||||||||
| WBInteraction000408169 | |||||||||
| Map_info | Map | X | Position | 22.2732 | Error | 0.004928 | |||
| Positive | Positive_clone | T10B10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
