WormBase Tree Display for Gene: WBGene00004922

WBGene00004922 Evidence: Person_evidence: WBPerson508
  SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 2
    Name: CGC_name: snt-2 Person_evidence: WBPerson508
      Sequence_name: F42G9.7
      Molecular_name: F42G9.7
        F42G9.7.1
        CE37915
      Other_name: CELE_F42G9.7 Accession_evidence: NDB BX284603
      Public_name: snt-2
    DB_info: Database: AceView gene 3B404
        WormQTL gene WBGene00004922
        WormFlux gene WBGene00004922
        NDB locus_tag CELE_F42G9.7
        Panther gene CAEEL|WormBase=WBGene00004922|UniProtKB=K8FE10
          family PTHR10024
        NCBI gene 185680
        RefSeq protein NM_064860.6
        SwissProt UniProtAcc K8FE10
        UniProt_GCRP UniProtAcc K8FE10
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 20 Oct 2005 08:55:16 WBPerson1867 Event: Acquires_merge: WBGene00015174
      Acquires_merge: WBGene00015174
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: snt
    Allele: WBVar00258545
      WBVar01769158
      WBVar01769159
      WBVar01769160
      WBVar01769161
      WBVar01769162
      WBVar01769163
      WBVar01769164
      WBVar01769165
      WBVar01769166
      WBVar01500082
      WBVar01769167
      WBVar01769168
      WBVar01769169
      WBVar01903470
      WBVar01903471
      WBVar01903472
      WBVar01903473
      WBVar01903474
      WBVar01903475
      WBVar01903476
      WBVar01903477
      WBVar01903478
      WBVar01903479
      WBVar01903480
      WBVar01903481
      WBVar01903482
      WBVar01903483
      WBVar01903484
      WBVar01903485
      WBVar01903486
      WBVar01499552
      WBVar01903487
      WBVar01903488
      WBVar01400623
      WBVar01903489
      WBVar01903490
      WBVar02069530
      WBVar01400634
      WBVar01498832
      WBVar00006511
      WBVar01825472
      WBVar00250682
      WBVar00006516
      WBVar00006521
      WBVar01951212
      WBVar02030145
      WBVar00006526
      WBVar01951213
      WBVar02030146
      WBVar00799371
      WBVar00799372
      WBVar00799373
      WBVar00006531
      WBVar00799374
      WBVar00068609
      WBVar00799375
      WBVar00006536
      WBVar00799376
      WBVar00799377
      WBVar00388625
      WBVar00799378
      WBVar00388626
      WBVar00799379
      WBVar00388627
      WBVar01564370
      WBVar00799380
      WBVar00388628
      WBVar01564371
      WBVar00799381
      WBVar00388629
      WBVar01564372
      WBVar01564373
      WBVar00799382
      WBVar00388630
      WBVar00388631
      WBVar01564374
      WBVar00799383
      WBVar00388632
      WBVar01564375
      WBVar00799384
      WBVar00388633
      WBVar01564376
      WBVar00799385
      WBVar00799386
      WBVar01564377
      WBVar00799387
      WBVar00799388
      WBVar00799389
      WBVar00031718
      WBVar00799390
      WBVar01322405
      WBVar00799391
      WBVar00235320
      WBVar00799392
      WBVar00305288
      WBVar00235321
      WBVar00799393
      WBVar00305289
      WBVar01322407
      WBVar00799394
      WBVar01322408
      WBVar01322411
      WBVar00799395
      WBVar00799396
      WBVar01322412
      WBVar01322414
      WBVar00799397
      WBVar01322415
      WBVar00799398
      WBVar01322416
      WBVar00799399
      WBVar00799400
      WBVar01322418
      WBVar00799401
      WBVar01912604
      WBVar01322419
      WBVar01322420
      WBVar00799402
      WBVar01700459
      WBVar01322421
      WBVar00799403
      WBVar00799404
      WBVar00799405
      WBVar00799406
      WBVar00799407
      WBVar00799408
      WBVar00799409
      WBVar00799410
      WBVar02131406
      WBVar00799411
      WBVar00799412
      WBVar00799413
      WBVar01255128
      WBVar00799414
      WBVar01255131
      WBVar00799415
      WBVar00799416
      WBVar01415168
      WBVar00799417
      WBVar00799418
      WBVar00799419
      WBVar00799420
      WBVar00799421
      WBVar00799422
      WBVar01917747
      WBVar00799423
      WBVar01917748
      WBVar00799424
      WBVar01917749
      WBVar00799425
      WBVar00799426
      WBVar01917750
      WBVar01917752
      WBVar00142380
      WBVar02117613
      WBVar02117614
      WBVar00263500
      WBVar00095454
    RNASeq_FPKM (74)
    GO_annotation (20)
    Ortholog (48)
    Paralog: WBGene00004921 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004923 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004924 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004926 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011682 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004925 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004316 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006306 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00020861 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable several functions, including calcium ion binding activity; phospholipid binding activity; and syntaxin binding activity. Predicted to be involved in cellular response to calcium ion; regulation of secretion by cell; and synaptic vesicle cycle. Located in dense core granule. Expressed in head neurons; intestine; and tail neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F42G9.7
    Corresponding_CDS_history: F42G9.7:wp137
    Corresponding_transcript: F42G9.7.1
    Other_sequence (19)
    Associated_feature: WBsf650817
      WBsf666444
      WBsf666540
      WBsf991158
      WBsf991159
      WBsf1014135
  Experimental_info: RNAi_result: WBRNAi00039036 Inferred_automatically: RNAi_primary
      WBRNAi00112394 Inferred_automatically: RNAi_primary
      WBRNAi00039035 Inferred_automatically: RNAi_primary
      WBRNAi00002650 Inferred_automatically: RNAi_primary
      WBRNAi00006729 Inferred_automatically: RNAi_primary
      WBRNAi00047137 Inferred_automatically: RNAi_primary
      WBRNAi00032160 Inferred_automatically: RNAi_primary
      WBRNAi00014854 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr10801
      Expr1019787
      Expr1032451
      Expr1151005
      Expr2015977
      Expr2034212
    Drives_construct: WBCnstr00017740
      WBCnstr00035320
    Construct_product: WBCnstr00035320
    Microarray_results (27)
    Expression_cluster (106)
    Interaction: WBInteraction000520044
      WBInteraction000548047
  Map_info: Map: III Position: -26.0124 Error: 0.026073
    Positive: Positive_clone: F42G9 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4612
        5047
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00042242
    WBPaper00042472
    WBPaper00055090
    WBPaper00061401
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene