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WormBase Tree Display for Gene: WBGene00004144

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Name Class

WBGene00004144SMapS_parentSequenceR11G11
IdentityVersion2
NameCGC_namesrlf-35Person_evidenceWBPerson260
Sequence_nameR11G11.7
Molecular_nameR11G11.7
R11G11.7.1
CE12752
Other_namepqn-60Person_evidenceWBPerson260
CELE_R11G11.7Accession_evidenceNDBBX284605
Public_namesrlf-35
DB_infoDatabaseAceViewgene5A979
WormQTLgeneWBGene00004144
WormFluxgeneWBGene00004144
NDBlocus_tagCELE_R11G11.7
PanthergeneCAEEL|WormBase=WBGene00004144|UniProtKB=O16948
familyPTHR21593
NCBIgene187826
RefSeqproteinNM_070824.2
TREEFAMTREEFAM_IDTF316074
TrEMBLUniProtAccO16948
UniProt_GCRPUniProtAccO16948
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:34WBPerson1971EventImportedInitial conversion from geneace
202 Mar 2022 23:57:00WBPerson51134Name_changeCGC_namesrlf-35
Other_namepqn-60
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsrlf
Allele (39)
RNASeq_FPKM (74)
GO_annotation00029013
00029014
Ortholog (27)
ParalogWBGene00003879Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00014173Caenorhabditis elegansFrom_analysisPanther
WBGene00020550Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00014006Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015514Caenorhabditis elegansFrom_analysisPanther
WBGene00016594Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007868Caenorhabditis elegansFrom_analysisPanther
WBGene00007262Caenorhabditis elegansFrom_analysisPanther
WBGene00004176Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00045207Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020014Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022553Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00004177Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008757Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011961Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00010886Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011484Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00014091Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010885Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00016179Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016180Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008759Caenorhabditis elegansFrom_analysisTreeFam
WBGene00019021Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009356Caenorhabditis elegansFrom_analysisPanther
WBGene00009573Caenorhabditis elegansFrom_analysisPanther
WBGene00022287Caenorhabditis elegansFrom_analysisPanther
WBGene00014090Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013328Caenorhabditis elegansFrom_analysisPanther
WBGene00007869Caenorhabditis elegansFrom_analysisPanther
WBGene00007871Caenorhabditis elegansFrom_analysisPanther
WBGene00044009Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019486Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008717Caenorhabditis elegansFrom_analysisPanther
WBGene00019065Caenorhabditis elegansFrom_analysisPanther
WBGene00235327Caenorhabditis elegansFrom_analysisPanther
WBGene00008716Caenorhabditis elegansFrom_analysisPanther
WBGene00044399Caenorhabditis elegansFrom_analysisPanther
WBGene00008753Caenorhabditis elegansFrom_analysisPanther
WBGene00013459Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionConcise_descriptionpqn-60 encodes a 154-residue, glutamine/asparagine (Q/N)-rich('prion'-like) protein, predicted to have coiled-coil structure, withmany paralogs in nematodes but no obvious non-nematode orthologs; PQN-60inhibits CEP-1- and HUS-1-dependent germline apoptosis, as do BMK-1,RAD-50, and RAD-51.Paper_evidenceWBPaper00005068
WBPaper00012788
WBPaper00012830
WBPaper00012882
WBPaper00012897
WBPaper00013003
WBPaper00023909
Curator_confirmedWBPerson567
Date_last_updated21 Apr 2007 00:00:00
Automated_descriptionEnriched in ABaraapapaa; ABaraapppaa; arcade cell; and pharynx based on microarray and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty chemicals including methylmercuric chloride; Mercuric Chloride; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR11G11.7
Corresponding_transcriptR11G11.7.1
Associated_featureWBsf979050
WBsf231344
WBsf231345
Experimental_infoRNAi_resultWBRNAi00064188Inferred_automaticallyRNAi_primary
WBRNAi00051817Inferred_automaticallyRNAi_primary
WBRNAi00064214Inferred_automaticallyRNAi_primary
WBRNAi00034873Inferred_automaticallyRNAi_primary
WBRNAi00017776Inferred_automaticallyRNAi_primary
Expr_patternExpr1014988
Expr1155477
Expr2015061
Expr2033296
Drives_constructWBCnstr00035672
Construct_productWBCnstr00035672
Microarray_results (14)
Expression_cluster (214)
Interaction (25)
Map_infoMapVPosition-19.9855
PositivePositive_cloneR11G11Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene