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WormBase Tree Display for Gene: WBGene00004144

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Name Class

WBGene00004144SMapS_parentSequenceR11G11
IdentityVersion2
NameCGC_namesrlf-35Person_evidenceWBPerson260
Sequence_nameR11G11.7
Molecular_nameR11G11.7
R11G11.7.1
CE12752
Other_namepqn-60Person_evidenceWBPerson260
CELE_R11G11.7Accession_evidenceNDBBX284605
Public_namesrlf-35
DB_infoDatabaseAceViewgene5A979
WormQTLgeneWBGene00004144
WormFluxgeneWBGene00004144
NDBlocus_tagCELE_R11G11.7
PanthergeneCAEEL|WormBase=WBGene00004144|UniProtKB=O16948
familyPTHR21593
NCBIgene187826
RefSeqproteinNM_070824.2
TREEFAMTREEFAM_IDTF316074
TrEMBLUniProtAccO16948
UniProt_GCRPUniProtAccO16948
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:34WBPerson1971EventImportedInitial conversion from geneace
202 Mar 2022 23:57:00WBPerson51134Name_changeCGC_namesrlf-35
Other_namepqn-60
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsrlf
AlleleWBVar01499528
WBVar01499167
WBVar02122833
WBVar01499740
WBVar01518953
WBVar01518954
WBVar01518955
WBVar01518956
WBVar01518957
WBVar01518958
WBVar01518959
WBVar01495344
WBVar01518960
WBVar01518961
WBVar01518962
WBVar01518963
WBVar01518964
WBVar01518965
WBVar01518966
WBVar01518967
WBVar01498849
WBVar01518968
WBVar00980005
WBVar01518969
WBVar01498850
WBVar00980006
WBVar00980007
WBVar00980008
WBVar00980009
WBVar01499775
WBVar00980010
WBVar01773859
WBVar02082600
WBVar02120511
WBVar01498906
WBVar00447924
WBVar01499674
WBVar01499675
WBVar01500066
RNASeq_FPKM (74)
GO_annotation00029013
00029014
Ortholog (27)
ParalogWBGene00003879Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00014173Caenorhabditis elegansFrom_analysisPanther
WBGene00020550Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00014006Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015514Caenorhabditis elegansFrom_analysisPanther
WBGene00016594Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007868Caenorhabditis elegansFrom_analysisPanther
WBGene00007262Caenorhabditis elegansFrom_analysisPanther
WBGene00004176Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00045207Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020014Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022553Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00004177Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008757Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011961Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00010886Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011484Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00014091Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010885Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00016179Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016180Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008759Caenorhabditis elegansFrom_analysisTreeFam
WBGene00019021Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009356Caenorhabditis elegansFrom_analysisPanther
WBGene00009573Caenorhabditis elegansFrom_analysisPanther
WBGene00022287Caenorhabditis elegansFrom_analysisPanther
WBGene00014090Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013328Caenorhabditis elegansFrom_analysisPanther
WBGene00007869Caenorhabditis elegansFrom_analysisPanther
WBGene00007871Caenorhabditis elegansFrom_analysisPanther
WBGene00044009Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019486Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008717Caenorhabditis elegansFrom_analysisPanther
WBGene00019065Caenorhabditis elegansFrom_analysisPanther
WBGene00235327Caenorhabditis elegansFrom_analysisPanther
WBGene00008716Caenorhabditis elegansFrom_analysisPanther
WBGene00044399Caenorhabditis elegansFrom_analysisPanther
WBGene00008753Caenorhabditis elegansFrom_analysisPanther
WBGene00013459Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionConcise_descriptionpqn-60 encodes a 154-residue, glutamine/asparagine (Q/N)-rich('prion'-like) protein, predicted to have coiled-coil structure, withmany paralogs in nematodes but no obvious non-nematode orthologs; PQN-60inhibits CEP-1- and HUS-1-dependent germline apoptosis, as do BMK-1,RAD-50, and RAD-51.Paper_evidenceWBPaper00005068
WBPaper00012788
WBPaper00012830
WBPaper00012882
WBPaper00012897
WBPaper00013003
WBPaper00023909
Curator_confirmedWBPerson567
Date_last_updated21 Apr 2007 00:00:00
Automated_descriptionEnriched in ABaraapapaa; ABaraapppaa; arcade cell; and pharynx based on microarray and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty chemicals including methylmercuric chloride; Mercuric Chloride; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR11G11.7
Corresponding_transcriptR11G11.7.1
Associated_featureWBsf979050
WBsf231344
WBsf231345
Experimental_infoRNAi_resultWBRNAi00064188Inferred_automaticallyRNAi_primary
WBRNAi00051817Inferred_automaticallyRNAi_primary
WBRNAi00064214Inferred_automaticallyRNAi_primary
WBRNAi00034873Inferred_automaticallyRNAi_primary
WBRNAi00017776Inferred_automaticallyRNAi_primary
Expr_patternExpr1014988
Expr1155477
Expr2015061
Expr2033296
Drives_constructWBCnstr00035672
Construct_productWBCnstr00035672
Microarray_results (14)
Expression_cluster (214)
Interaction (25)
Map_infoMapVPosition-19.9855
PositivePositive_cloneR11G11Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene