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WormBase Tree Display for Gene: WBGene00003956

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Name Class

WBGene00003956SMapS_parentSequenceZK112
IdentityVersion1
NameCGC_namepcp-1Person_evidenceWBPerson564
Sequence_nameZK112.1
Molecular_nameZK112.1
ZK112.1.1
CE25679
Other_nameCELE_ZK112.1Accession_evidenceNDBBX284603
Public_namepcp-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpcp
Allele (46)
Strain (2)
RNASeq_FPKM (74)
GO_annotation00043476
00043477
00043478
00043479
00043480
00112067
00112068
Ortholog (47)
ParalogWBGene00016134Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017592Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022801Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019682Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018984Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017594Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00044302Caenorhabditis elegansFrom_analysisPanther
WBGene00003959Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003957Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003958Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionpcp-1 encodes a predicted prolylcarboxypeptidase (PRCP); by homology, PCP-1 is predicted to function as a lysosomal serine-type peptidase that hydrolyzes proteins containing a penultimate proline residue.Paper_evidenceWBPaper00031841
Curator_confirmedWBPerson1843
Date_last_updated09 May 2008 00:00:00
Automated_descriptionPredicted to enable dipeptidyl-peptidase activity. Predicted to be involved in proteolysis. Is an ortholog of human PRCP (prolylcarboxypeptidase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK112.1
Corresponding_transcriptZK112.1.1
Other_sequence (58)
Associated_featureWBsf658491
WBsf993130
WBsf993131
WBsf1015305
WBsf225277
WBsf225278
Experimental_infoRNAi_resultWBRNAi00089213Inferred_automaticallyRNAi_primary
WBRNAi00038151Inferred_automaticallyRNAi_primary
WBRNAi00090619Inferred_automaticallyRNAi_primary
WBRNAi00021810Inferred_automaticallyRNAi_primary
WBRNAi00059119Inferred_automaticallyRNAi_primary
WBRNAi00082546Inferred_automaticallyRNAi_primary
WBRNAi00082670Inferred_automaticallyRNAi_primary
WBRNAi00005187Inferred_automaticallyRNAi_primary
Expr_patternExpr7183
Expr7184
Expr1011465
Expr1031882
Expr1162543
Expr2014783
Expr2033017
Drives_constructWBCnstr00002964
WBCnstr00004473
WBCnstr00035776
Construct_productWBCnstr00016483
WBCnstr00035776
Microarray_results (19)
Expression_clusterWBPaper00030922:glycosylated_protein
WBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_embryo_SelectivelyEnriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038168:lin-15B(n744)_downregulated
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00044030:nhr-8(hd117)_upregulated
WBPaper00044260:nicotinc-acid_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045401:N.parisii_40h_downregulated
WBPaper00045401:N.parisii_64h_downregulated
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_downregulated
WBPaper00045861:set-2(ok952)_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046497:B.thuringiensis_downregulated_protein
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048926:miaserin_upregulated_adult-day5
WBPaper00048926:miaserin_upregulated_adult-day10
WBPaper00048952:glucose_induced
WBPaper00048988:neuron_expressed
WBPaper00049018:swsn-2.2(RNAi)_upregulated
WBPaper00049217:TCER-1_downregulated
WBPaper00049334:CE_intestine_enriched
WBPaper00049484:elt-2(RNAi)_downregulated_L1
WBPaper00049484:elt-2(RNAi)_downregulated_L4
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049732:blmp-1(tm548);daf-7(e1372ts)_vs_daf-7(e1372ts)_upregulated
WBPaper00049905:Age_variant_expression
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_100-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
WBPaper00050193:cec-4(ok3124)_downregulated_L1
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051039:intestine_enriched
WBPaper00051305:vit-2(ac3)_downregulated
WBPaper00052868:ALA_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053814:15C_downregulated_PY79
WBPaper00053814:25C_downregulated_OP50
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056586:kri-1(ok1251)_upregulated
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00056826:hmc_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057006:DietaryRestriction_upregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058665:amino-functionized-graphene-oxide_downregulated_mRNA
WBPaper00058665:graphene-oxide_downregulated_mRNA
WBPaper00058969:RIS_depleted
WBPaper00059253:sucrose_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059604:fluvastatin_upregulated_dlk-1(km12)
WBPaper00059604:fluvastatin_upregulated_N2
WBPaper00059609:malt-1_ilc-17.1_nfki-1_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059839:S.maltophilia_regulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060084:cco-1(RNAi)_downregulated_lin-40(yth27)
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060871:M.humicola-extract_4h_regulated
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00061007:HB101_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:PVQ_parent
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061466:nath-10(icb102)_downregulated
WBPaper00061527:C18B2.5-haf-4_181
WBPaper00061530:nhr-49(e2144)_downregulated
WBPaper00061823:mex-3(spr9)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064071:NHR-49_interacting
WBPaper00064130:Beta-Amyloid_24h_upregulated_mRNA
WBPaper00064130:Beta-Amyloid_downregulated_protein
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064494:postdauer_downregulated_AWA
WBPaper00064716:paraquat_downregulated
WBPaper00064735:bet-1(uth41)_vs_N2_upregulated
WBPaper00064939:vit-5(RNAi)_upregulated
WBPaper00064952:Day5_vs_L4_downregulated_25C
WBPaper00065029:cadmium_downregulated
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:N2_N.ausubeli_regulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
WBPaper00065258:anchor-cell_depleted
WBPaper00065315:mating_downregulated_Day2-7
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day5
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
WBPaper00065841:3_1
WBPaper00065841:3_2
WBPaper00065841:3_5
WBPaper00065945:global-rpoa-2(-)_downregulated_transcript
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065984:pals-17(syb3980)_downregulated
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4386_cluster_2_3
cgc4489_group_7
WBPaper00005124:estrogen_10-5M_regulated
WBPaper00005124:progesterone_10-7M_regulated
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00031832:slr-2_regulated
WBPaper00032062:age_regulated_genes
WBPaper00034739:N2moreDR1350
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-8_regulated
WBPaper00035892:Y.pestis_regulated
WBPaper00036286:Pattern_C
WBPaper00037695:WC_5-day
WBPaper00038462:aging_downregulated
WBPaper00040184:hcf-1down_sir-2.1down_daf-2nc
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040876:mir-35_downregulated
WBPaper00040963:TA100_up
WBPaper00040963:TA300_up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041906:I-3690_vs_OP50_3d
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00042258:DA1877_upregulated_GravidAdult
WBPaper00044091:Bpseudomallei_repressed_4h
WBPaper00044091:Bpseudomallei_repressed_8h
WBPaper00044091:Bpseudomallei_repressed_12h
WBPaper00044535:male_downregulated
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00045673:colistin_upregulated
WBPaper00048929:ethosuximide_upregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00050538:Fasting_upregulated
WBPaper00050538:Fasting_upregulated_cholesterol-dependent
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:Cluster_A
InteractionWBInteraction000238501
WBInteraction000258509
WBInteraction000261986
WBInteraction000276574
WBInteraction000410137
WBInteraction000428284
WBInteraction000553127
WBInteraction000564135
WBInteraction000570991
WBInteraction000571034
Map_infoMapIIIPosition-0.612466Error0.002558
PositivePositive_cloneZK112Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00058665
WBPaper00061547
WBPaper00063976
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene