WormBase Tree Display for Gene: WBGene00044302
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| WBGene00044302 | SMap | S_parent | Sequence | CHROMOSOME_IV | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | ||||||||
| Name | Sequence_name | F28E10.5 | ||||||||
| Molecular_name | F28E10.5 | |||||||||
| Other_name | CELE_F28E10.5 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | F28E10.5 | |||||||||
| DB_info | Database | AceView | gene | 4F363_2 | ||||||
| WormFlux | gene | WBGene00044302 | ||||||||
| NDB | locus_tag | CELE_F28E10.5 | ||||||||
| NCBI | gene | 184681 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 20 Apr 2005 10:00:31 | WBPerson1867 | Event | Created | ||||
| 2 | 13 Nov 2018 10:11:22 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| 3 | 14 Nov 2018 14:30:30 | WBPerson4025 | Event | Acquires_merge | WBGene00017595 | |||||
| 4 | 14 Nov 2018 14:30:30 | WBPerson4025 | Event | Acquires_merge | WBGene00017596 | |||||
| Acquires_merge | WBGene00017595 | |||||||||
| WBGene00017596 | ||||||||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (36) | ||||||||||
| In_cluster | conserved_RDE-1_cluster | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00143874 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| WBGene00209355 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||||
| WBGene00091704 | Pristionchus pacificus | From_analysis | Inparanoid_8 | |||||||
| Paralog | WBGene00003956 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00003957 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00003958 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00003959 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00016134 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00017592 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00017594 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00018984 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00019682 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00022801 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| Structured_description | Automated_description | Enriched in several structures, including NSM; germ line; hyp3; interfacial epithelial cell; and intestine based on RNA-seq; tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including methylmercuric chloride; stavudine; and Psoralens based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F28E10.5:wp239 | ||||||||
| F28E10.5:wp268 | ||||||||||
| Corresponding_pseudogene | F28E10.5 | |||||||||
| Associated_feature | WBsf645937 | |||||||||
| WBsf660129 | ||||||||||
| WBsf660130 | ||||||||||
| Experimental_info | Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00023645 | |||||||||
| WBCnstr00027175 | ||||||||||
| WBCnstr00027176 | ||||||||||
| Construct_product | WBCnstr00023645 | |||||||||
| WBCnstr00027175 | ||||||||||
| WBCnstr00027176 | ||||||||||
| Microarray_results (36) | ||||||||||
| Expression_cluster (168) | ||||||||||
| Map_info | Positive | Positive_clone | F28E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | IV | 0.475622 | ||||||||
| Reference | WBPaper00038491 | |||||||||
| WBPaper00055090 | ||||||||||
| Method | Gene |
