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WormBase Tree Display for Gene: WBGene00003956

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Name Class

WBGene00003956SMapS_parentSequenceZK112
IdentityVersion1
NameCGC_namepcp-1Person_evidenceWBPerson564
Sequence_nameZK112.1
Molecular_nameZK112.1
ZK112.1.1
CE25679
Other_nameCELE_ZK112.1Accession_evidenceNDBBX284603
Public_namepcp-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpcp
Allele (46)
StrainWBStrain00002421
WBStrain00002233
RNASeq_FPKM (74)
GO_annotation00043476
00043477
00043478
00043479
00043480
00112067
00112068
Ortholog (47)
ParalogWBGene00016134Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017592Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022801Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019682Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018984Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017594Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00044302Caenorhabditis elegansFrom_analysisPanther
WBGene00003959Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003957Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003958Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionpcp-1 encodes a predicted prolylcarboxypeptidase (PRCP); by homology, PCP-1 is predicted to function as a lysosomal serine-type peptidase that hydrolyzes proteins containing a penultimate proline residue.Paper_evidenceWBPaper00031841
Curator_confirmedWBPerson1843
Date_last_updated09 May 2008 00:00:00
Automated_descriptionPredicted to enable dipeptidyl-peptidase activity. Predicted to be involved in proteolysis. Is an ortholog of human PRCP (prolylcarboxypeptidase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK112.1
Corresponding_transcriptZK112.1.1
Other_sequence (58)
Associated_featureWBsf658491
WBsf993130
WBsf993131
WBsf1015305
WBsf225277
WBsf225278
Experimental_infoRNAi_resultWBRNAi00089213Inferred_automaticallyRNAi_primary
WBRNAi00038151Inferred_automaticallyRNAi_primary
WBRNAi00090619Inferred_automaticallyRNAi_primary
WBRNAi00021810Inferred_automaticallyRNAi_primary
WBRNAi00059119Inferred_automaticallyRNAi_primary
WBRNAi00082546Inferred_automaticallyRNAi_primary
WBRNAi00082670Inferred_automaticallyRNAi_primary
WBRNAi00005187Inferred_automaticallyRNAi_primary
Expr_patternExpr7183
Expr7184
Expr1011465
Expr1031882
Expr1162543
Expr2014783
Expr2033017
Drives_constructWBCnstr00002964
WBCnstr00004473
WBCnstr00035776
Construct_productWBCnstr00016483
WBCnstr00035776
Microarray_results (19)
Expression_cluster (220)
InteractionWBInteraction000238501
WBInteraction000258509
WBInteraction000261986
WBInteraction000276574
WBInteraction000410137
WBInteraction000428284
WBInteraction000553127
WBInteraction000564135
WBInteraction000570991
WBInteraction000571034
Map_infoMapIIIPosition-0.612466Error0.002558
PositivePositive_cloneZK112Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00058665
WBPaper00061547
WBPaper00063976
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene