WormBase Tree Display for Expression_cluster: WBPaper00044260:nicotinc-acid_upregulated
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| WBPaper00044260:nicotinc-acid_upregulated | Description | Genes that showed increased expression after nicotic acid (NA) treatment. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Raw counts for the genes were analyzed using the R Statistical Computing Environment and the Bioconductor packages DESeq and edgeR. Both packages provide statistical routines for determining differential expression in digital gene expression data using a model based on the negative binomial distribution. The resulting p-values were adjusted using the Benjamini and Hochberg's approach for controlling the false discovery rate (FDR). If both FDR values (by DESeq and edgeR) were smaller than p = 0.05, genes were assigned as differentially expressed. | ||
| Reference | WBPaper00044260 | ||
| Based_on_WB_Release | 220 | ||
| Gene (479) | |||
| Attribute_of | RNASeq | ||
| Regulation | Regulated_by_molecule | WBMol:00002714 |
