WormBase Tree Display for Gene: WBGene00003094

WBGene00003094 SMap: S_parent: Sequence: F58B3
  Identity: Version: 1
    Name: CGC_name: lys-5 Person_evidence: WBPerson168
      Sequence_name: F58B3.2
      Molecular_name: F58B3.2
        F58B3.2.1
        CE06004
      Other_name: CELE_F58B3.2 Accession_evidence: NDB BX284604
      Public_name: lys-5
    DB_info: Database: AceView gene 4M388
        WormQTL gene WBGene00003094
        WormFlux gene WBGene00003094
        NDB locus_tag CELE_F58B3.2
        Panther gene CAEEL|WormBase=WBGene00003094|UniProtKB=Q20967
          family PTHR23208
        NCBI gene 186491
        RefSeq protein NM_069792.6
        SwissProt UniProtAcc Q20967
        TREEFAM TREEFAM_ID TF316378
        UniProt_GCRP UniProtAcc Q20967
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:30 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lys
    Allele (12)
    RNASeq_FPKM (74)
    GO_annotation (20)
    Ortholog (48)
    Paralog: WBGene00003090 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003091 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00003092 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00003093 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00003096 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003099 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00003095 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00003098 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00003097 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable lysozyme activity. Involved in defense response to Gram-positive bacterium. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F58B3.2
    Corresponding_transcript: F58B3.2.1
    Other_sequence (73)
    Associated_feature: WBsf230900
  Experimental_info: RNAi_result: WBRNAi00092215 Inferred_automatically: RNAi_primary
      WBRNAi00092216 Inferred_automatically: RNAi_primary
      WBRNAi00048948 Inferred_automatically: RNAi_primary
      WBRNAi00075955 Inferred_automatically: RNAi_primary
      WBRNAi00015942 Inferred_automatically: RNAi_primary
      WBRNAi00033071 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012348
      Expr1152685
      Expr2013316
      Expr2031547
    Drives_construct: WBCnstr00009964
      WBCnstr00036234
    Construct_product: WBCnstr00009964
      WBCnstr00036234
    Microarray_results (20)
    Expression_cluster (257)
    Interaction: WBInteraction000120186
      WBInteraction000120310
      WBInteraction000136314
      WBInteraction000200300
      WBInteraction000215118
      WBInteraction000266823
      WBInteraction000273232
      WBInteraction000273918
      WBInteraction000275880
      WBInteraction000279607
      WBInteraction000289493
      WBInteraction000291680
      WBInteraction000297178
      WBInteraction000301580
      WBInteraction000303143
      WBInteraction000303252
      WBInteraction000307367
      WBInteraction000309205
      WBInteraction000311102
      WBInteraction000312596
      WBInteraction000315446
      WBInteraction000320787
      WBInteraction000325625
      WBInteraction000331961
      WBInteraction000332174
      WBInteraction000332738
      WBInteraction000333242
      WBInteraction000334194
      WBInteraction000334705
      WBInteraction000335494
      WBInteraction000336083
      WBInteraction000347655
      WBInteraction000350368
      WBInteraction000354632
      WBInteraction000354899
      WBInteraction000356268
      WBInteraction000359466
      WBInteraction000360214
      WBInteraction000360258
      WBInteraction000363476
      WBInteraction000370105
      WBInteraction000370326
      WBInteraction000372173
      WBInteraction000372266
      WBInteraction000378018
      WBInteraction000378402
      WBInteraction000381056
      WBInteraction000381388
      WBInteraction000384940
      WBInteraction000384986
      WBInteraction000390920
      WBInteraction000391020
      WBInteraction000394041
      WBInteraction000397292
      WBInteraction000398711
      WBInteraction000402053
      WBInteraction000404271
      WBInteraction000405538
      WBInteraction000408172
      WBInteraction000408948
      WBInteraction000409174
      WBInteraction000409245
      WBInteraction000411589
      WBInteraction000418902
      WBInteraction000424949
      WBInteraction000426128
      WBInteraction000432738
      WBInteraction000433203
      WBInteraction000433804
      WBInteraction000437189
      WBInteraction000438997
      WBInteraction000440258
      WBInteraction000441031
      WBInteraction000441357
      WBInteraction000446193
      WBInteraction000446806
      WBInteraction000448377
      WBInteraction000453539
      WBInteraction000457052
      WBInteraction000505015
      WBInteraction000518604
      WBInteraction000518605
      WBInteraction000518663
      WBInteraction000520130
      WBInteraction000541044
      WBInteraction000541052
      WBInteraction000541056
  Map_info: Map: IV Position: 5.07846 Error: 0.003698
    Positive: Positive_clone: F58B3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (13)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene