WormBase Tree Display for Gene: WBGene00000402
expand all nodes | collapse all nodes | view schema
WBGene00000402 | SMap | S_parent | Sequence | C45G7 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 4 | |||||
Name | CGC_name | cdh-10 | Person_evidence | WBPerson698 | |||
Sequence_name | C45G7.5 | ||||||
Molecular_name | C45G7.5 | ||||||
C45G7.5.1 | |||||||
CE48895 | |||||||
Other_name | CELE_C45G7.5 | Accession_evidence | NDB | BX284604 | |||
Public_name | cdh-10 | ||||||
DB_info | Database | AceView | gene | 4D204 | |||
WormQTL | gene | WBGene00000402 | |||||
WormFlux | gene | WBGene00000402 | |||||
NDB | locus_tag | CELE_C45G7.5 | |||||
Panther | gene | CAEEL|WormBase=WBGene00000402|UniProtKB=Q5F4U0 | |||||
family | PTHR24028 | ||||||
NCBI | gene | 183476 | |||||
RefSeq | protein | NM_067803.6 | |||||
TREEFAM | TREEFAM_ID | TF352007 | |||||
TrEMBL | UniProtAcc | Q5F4U0 | |||||
UniProt_GCRP | UniProtAcc | Q5F4U0 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (4) | ||||||
Acquires_merge | WBGene00016672 | ||||||
WBGene00043063 | |||||||
Split_into | WBGene00235340 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cdh | ||||||
Allele (664) | |||||||
Strain | WBStrain00032842 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00081297 | ||||||
00081298 | |||||||
00081299 | |||||||
00081300 | |||||||
00107338 | |||||||
00107339 | |||||||
00107340 | |||||||
Ortholog (88) | |||||||
Paralog | WBGene00000395 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00000396 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00000397 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00000399 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00000401 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00017576 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00019994 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00022103 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | cdh-10 encodes a member of the cadherin superfamily. | Paper_evidence | WBPaper00004508 | |||
Curator_confirmed | WBPerson48 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to be located in membrane. Expressed in K cell; K' cell; mc1; mc2; and seam cell. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C45G7.5 | |||||
Corresponding_CDS_history | C45G7.5:wp131 | ||||||
C45G7.5:wp138 | |||||||
C45G7.5:wp239 | |||||||
Corresponding_transcript | C45G7.5.1 | ||||||
Other_sequence (15) | |||||||
Associated_feature (11) | |||||||
Experimental_info | RNAi_result | WBRNAi00011987 | Inferred_automatically | RNAi_primary | |||
WBRNAi00042542 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr154 | ||||||
Expr2013 | |||||||
Expr2726 | |||||||
Expr1021364 | |||||||
Expr1030220 | |||||||
Expr1146527 | |||||||
Expr2009798 | |||||||
Expr2028038 | |||||||
Drives_construct | WBCnstr00010921 | ||||||
Microarray_results (24) | |||||||
Expression_cluster (222) | |||||||
Interaction | WBInteraction000030031 | ||||||
WBInteraction000501611 | |||||||
WBInteraction000503109 | |||||||
Map_info | Map | IV | Position | -7.47388 | Error | 0.023949 | |
Positive | Positive_clone | C45G7 | Inferred_automatically (2) | ||||
Pseudo_map_position | |||||||
Reference | WBPaper00004508 | ||||||
WBPaper00013424 | |||||||
WBPaper00018119 | |||||||
WBPaper00055090 | |||||||
WBPaper00058555 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |