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WormBase Tree Display for Gene: WBGene00000399

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Name Class

WBGene00000399SMapS_parentSequenceR05H10
IdentityVersion1
NameCGC_namecdh-7Person_evidenceWBPerson698
Sequence_nameR05H10.6
Molecular_nameR05H10.6
R05H10.6.1
CE38092
Other_nameCELE_R05H10.6Accession_evidenceNDBBX284602
Public_namecdh-7
DB_infoDatabaseAceViewgene2P135
WormQTLgeneWBGene00000399
WormFluxgeneWBGene00000399
NDBlocus_tagCELE_R05H10.6
PanthergeneCAEEL|WormBase=WBGene00000399|UniProtKB=O62328
familyPTHR24026
NCBIgene175143
RefSeqproteinNM_064674.6
TrEMBLUniProtAccO62328
UniProt_GCRPUniProtAccO62328
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcdh
Allele (160)
StrainWBStrain00031423
RNASeq_FPKM (74)
GO_annotation00037528
00037529
00037530
00037531
00106993
00106994
00106995
00106996
Ortholog (25)
ParalogWBGene00000397Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019994Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000395Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000396Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000401Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000402Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017576Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022103Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Predicted to be involved in homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in plasma membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSR05H10.6
Corresponding_CDS_historyR05H10.6:wp128
R05H10.6:wp139
Corresponding_transcriptR05H10.6.1
Other_sequenceCJC04923_1
CJC14481_1
Associated_featureWBsf981371
WBsf990838
WBsf990839
WBsf1013915
WBsf1013916
WBsf222514
Experimental_infoRNAi_resultWBRNAi00051339Inferred_automaticallyRNAi_primary
WBRNAi00034638Inferred_automaticallyRNAi_primary
WBRNAi00017475Inferred_automaticallyRNAi_primary
Expr_patternExpr1019067
Expr1155032
Expr2028044
Drives_constructWBCnstr00037569
Construct_productWBCnstr00037569
Microarray_results (20)
Expression_cluster (210)
Interaction (47)
Map_infoMapIIPosition23.6184Error0.024266
PositivePositive_cloneR05H10Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4193
Pseudo_map_position
ReferenceWBPaper00004508
WBPaper00013424
WBPaper00018119
WBPaper00032446
WBPaper00038491
WBPaper00055090
WBPaper00058555
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene