WormBase Tree Display for Gene: WBGene00000399

WBGene00000399 SMap: S_parent: Sequence: R05H10
  Identity: Version: 1
    Name: CGC_name: cdh-7 Person_evidence: WBPerson698
      Sequence_name: R05H10.6
      Molecular_name: R05H10.6
        R05H10.6.1
        CE38092
      Other_name: CELE_R05H10.6 Accession_evidence: NDB BX284602
      Public_name: cdh-7
    DB_info: Database: AceView gene 2P135
        WormQTL gene WBGene00000399
        WormFlux gene WBGene00000399
        NDB locus_tag CELE_R05H10.6
        Panther gene CAEEL|WormBase=WBGene00000399|UniProtKB=O62328
          family PTHR24026
        NCBI gene 175143
        RefSeq protein NM_064674.6
        TrEMBL UniProtAcc O62328
        UniProt_GCRP UniProtAcc O62328
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cdh
    Allele: WBVar01253879
      WBVar00385972
      WBVar01900685
      WBVar00385973
      WBVar00385974
      WBVar01499702
      WBVar00385975
      WBVar00385976
      WBVar00385977
      WBVar00385978
      WBVar00385979
      WBVar00385980
      WBVar00385981
      WBVar00385982
      WBVar00385983
      WBVar00385984
      WBVar00385985
      WBVar00385986
      WBVar01950679
      WBVar01950680
      WBVar00385987
      WBVar01950681
      WBVar00385988
      WBVar01267640
      WBVar00385989
      WBVar00277069
      WBVar00385990
      WBVar01267651
      WBVar00385991
      WBVar00385992
      WBVar00385993
      WBVar00385994
      WBVar01498435
      WBVar01994565
      WBVar01415013
      WBVar02109960
      WBVar01836798
      WBVar01563417
      WBVar01563418
      WBVar01563419
      WBVar01563420
      WBVar01944285
      WBVar00557355
      WBVar00557356
      WBVar00557357
      WBVar00557359
      WBVar02012417
      WBVar02033915
      WBVar01442576
      WBVar01442578
      WBVar01442583
      WBVar00791645
      WBVar01896152
      WBVar00791646
      WBVar00791647
      WBVar00791648
      WBVar02041088
      WBVar00791649
      WBVar00791650
      WBVar00791651
      WBVar00791652
      WBVar00791653
      WBVar00791654
      WBVar02085168
      WBVar00791655
      WBVar00791656
      WBVar00791657
      WBVar00269374
      WBVar00791658
      WBVar00791659
      WBVar00791660
      WBVar00791661
      WBVar00791662
      WBVar02087752
      WBVar00791663
      WBVar02087753
      WBVar00791664
      WBVar00791665
      WBVar00791666
      WBVar00791667
      WBVar00791668
      WBVar00791669
      WBVar00791670
      WBVar00791671
      WBVar00791672
      WBVar00791673
      WBVar00791674
      WBVar00791675
      WBVar00791676
      WBVar00791677
      WBVar00791678
      WBVar00791679
      WBVar00791680
      WBVar00791681
      WBVar00791682
      WBVar00791683
      WBVar00791684
      WBVar00791685
      WBVar00091722
      WBVar00791686
      WBVar00791687
      WBVar00791688
      WBVar00791689
      WBVar02131231
      WBVar00791690
      WBVar02131232
      WBVar00791691
      WBVar00791692
      WBVar01696610
      WBVar01696611
      WBVar00791693
      WBVar00791694
      WBVar01696612
      WBVar00791695
      WBVar00791696
      WBVar00791697
      WBVar00791698
      WBVar01395577
      WBVar00791699
      WBVar00791700
      WBVar00791701
      WBVar00791702
      WBVar00791703
      WBVar00791704
      WBVar01395588
      WBVar00791705
      WBVar00018723
      WBVar00018728
      WBVar00018733
      WBVar00001731
      WBVar00018738
      WBVar00018748
      WBVar00001741
      WBVar01321124
      WBVar00018753
      WBVar01321125
      WBVar01321126
      WBVar01321135
      WBVar01321137
      WBVar01498941
      WBVar00018763
      WBVar01321141
      WBVar01321142
      WBVar01499314
      WBVar01321144
      WBVar00018768
      WBVar01321145
      WBVar01548142
      WBVar00018773
      WBVar01548143
      WBVar01548144
      WBVar00018778
      WBVar00018783
      WBVar01937568
      WBVar00018788
      WBVar01253870
      WBVar01253871
      WBVar01253876
      WBVar01253878
      WBVar01826892
    Strain: WBStrain00031423
    RNASeq_FPKM (74)
    GO_annotation: 00037710
      00037711
      00037712
      00107331
      00107332
      00107333
      00107334
    Ortholog (25)
    Paralog: WBGene00000397 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00019994 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000395 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000396 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000401 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000402 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017576 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00022103 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Predicted to be involved in homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in plasma membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R05H10.6
    Corresponding_CDS_history: R05H10.6:wp128
      R05H10.6:wp139
    Corresponding_transcript: R05H10.6.1
    Other_sequence: CJC04923_1
      CJC14481_1
    Associated_feature: WBsf981371
      WBsf990838
      WBsf990839
      WBsf1013915
      WBsf1013916
      WBsf222514
  Experimental_info: RNAi_result: WBRNAi00051339 Inferred_automatically: RNAi_primary
      WBRNAi00034638 Inferred_automatically: RNAi_primary
      WBRNAi00017475 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019067
      Expr1155032
      Expr2028044
    Drives_construct: WBCnstr00037569
    Construct_product: WBCnstr00037569
    Microarray_results (20)
    Expression_cluster (223)
    Interaction (47)
  Map_info: Map: II Position: 23.6184 Error: 0.024266
    Positive: Positive_clone: R05H10 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4193
    Pseudo_map_position
  Reference: WBPaper00004508
    WBPaper00013424
    WBPaper00018119
    WBPaper00032446
    WBPaper00038491
    WBPaper00055090
    WBPaper00058555
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene