WormBase Tree Display for Gene: WBGene00002267

WBGene00002267 SMap: S_parent: Sequence: C44F1
  Identity: Version: 1
    Name: CGC_name: lec-4
      Sequence_name: C44F1.3
      Molecular_name: C44F1.3
        C44F1.3.1
        CE02163
      Other_name: CELE_C44F1.3 Accession_evidence: NDB BX284603
      Public_name: lec-4
    DB_info: Database: AceView gene 3E862
        WormQTL gene WBGene00002267
        WormFlux gene WBGene00002267
        NDB locus_tag CELE_C44F1.3
        Panther gene CAEEL|WormBase=WBGene00002267|UniProtKB=Q18625
          family PTHR11346
        NCBI gene 175488
        RefSeq protein NM_065362.9
        TrEMBL UniProtAcc Q18625
        UniProt_GCRP UniProtAcc Q18625
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:27 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lec
    Allele (34)
    Legacy_information: [Arata Y] No mutants known. Encodes predicted galectin. Predicted gene C44F1.3
    RNASeq_FPKM (74)
    GO_annotation: 00061868
      00061869
      00061870
      00061871
      00061872
      00110339
    Ortholog (42)
    Paralog: WBGene00002264 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002265 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002266 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00044267 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00044782 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00002271 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002270 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00206478 Caenorhabditis elegans From_analysis: Panther
      WBGene00002272 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002273 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002274 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00017080 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008284 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002268 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018254 Caenorhabditis elegans From_analysis: Panther
      WBGene00018255 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018649 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009748 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004165 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009747 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009751 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018651 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007768 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009746 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00235368 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00011390 Caenorhabditis elegans From_analysis: Panther
      WBGene00018650 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002269 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: lec-4 encodes a predicted galectin that exhibits sugar binding properties in vitro. Paper_evidence: WBPaper00004274
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enables galactoside binding activity. Located in membrane raft. Is an ortholog of human LGALS9 (galectin 9) and LGALS9B (galectin 9B). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C44F1.3
    Corresponding_transcript: C44F1.3.1
    Other_sequence (192)
    Associated_feature: WBsf650931
      WBsf991899
      WBsf991900
      WBsf991901
      WBsf1014631
      WBsf1014632
      WBsf226390
      WBsf226391
      WBsf226392
  Experimental_info: RNAi_result: WBRNAi00011953 Inferred_automatically: RNAi_primary
      WBRNAi00042492 Inferred_automatically: RNAi_primary
      WBRNAi00006002 Inferred_automatically: RNAi_primary
      WBRNAi00092920 Inferred_automatically: RNAi_primary
      WBRNAi00029813 Inferred_automatically: RNAi_primary
    Expr_pattern (4)
    Drives_construct: WBCnstr00036345
    Construct_product: WBCnstr00036345
    Microarray_results (19)
    Expression_cluster (213)
    Interaction: WBInteraction000538828
      WBInteraction000540312
      WBInteraction000552309
      WBInteraction000552501
      WBInteraction000560845
      WBInteraction000561989
      WBInteraction000564012
      WBInteraction000567096
      WBInteraction000568248
  Map_info: Map: III Position: -4.25302 Error: 0.000245
    Positive: Positive_clone: C44F1 Person_evidence: WBPerson763
          Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (7)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene