WormBase Tree Display for Gene: WBGene00002272
expand all nodes | collapse all nodes | view schema
| WBGene00002272 | SMap | S_parent | Sequence | C16H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | lec-9 | |||||||
| Sequence_name | C16H3.2 | ||||||||
| Molecular_name | C16H3.2 | ||||||||
| C16H3.2.1 | |||||||||
| CE08236 | |||||||||
| Other_name | CELE_C16H3.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | lec-9 | ||||||||
| DB_info | Database | AceView | gene | XS215 | |||||
| WormQTL | gene | WBGene00002272 | |||||||
| WormFlux | gene | WBGene00002272 | |||||||
| NDB | locus_tag | CELE_C16H3.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002272|UniProtKB=G5EC10 | |||||||
| family | PTHR11346 | ||||||||
| NCBI | gene | 181786 | |||||||
| RefSeq | protein | NM_078443.9 | |||||||
| TrEMBL | UniProtAcc | G5EC10 | |||||||
| UniProt_GCRP | UniProtAcc | G5EC10 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lec | ||||||||
| Allele (18) | |||||||||
| Legacy_information | [Arata Y] No mutants known. Encodes predicted galectin. Predicted gene C16H3.2 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00010709 | ||||||||
| 00010710 | |||||||||
| 00010711 | |||||||||
| 00010712 | |||||||||
| 00010713 | |||||||||
| 00110344 | |||||||||
| Ortholog (39) | |||||||||
| Paralog (26) | |||||||||
| Structured_description | Concise_description | lec-9 encodes a predicted lectin that affects embryonic viability. | Paper_evidence | WBPaper00004651 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables glycolipid binding activity. Located in cytoplasm. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C16H3.2 | |||||||
| Corresponding_transcript | C16H3.2.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf648884 | ||||||||
| WBsf655156 | |||||||||
| WBsf663750 | |||||||||
| WBsf663751 | |||||||||
| WBsf718848 | |||||||||
| WBsf1008966 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00028981 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010876 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001288 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040748 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011910 | ||||||||
| Expr1031339 | |||||||||
| Expr1144789 | |||||||||
| Expr2013042 | |||||||||
| Expr2031274 | |||||||||
| Drives_construct | WBCnstr00036341 | ||||||||
| Construct_product | WBCnstr00036341 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (254) | |||||||||
| Interaction (29) | |||||||||
| Map_info | Map | X | Position | 24.5266 | Error | 0.040461 | |||
| Positive | Positive_clone | C16H3 | Person_evidence | WBPerson763 | |||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004651 | ||||||||
| WBPaper00006465 | |||||||||
| WBPaper00032075 | |||||||||
| WBPaper00034766 | |||||||||
| WBPaper00037859 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039111 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
