WormBase Tree Display for Gene: WBGene00002272
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WBGene00002272 | SMap | S_parent | Sequence | C16H3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | lec-9 | |||||||
Sequence_name | C16H3.2 | ||||||||
Molecular_name (3) | |||||||||
Other_name | CELE_C16H3.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | lec-9 | ||||||||
DB_info | Database | AceView | gene | XS215 | |||||
WormQTL | gene | WBGene00002272 | |||||||
WormFlux | gene | WBGene00002272 | |||||||
NDB | locus_tag | CELE_C16H3.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00002272|UniProtKB=G5EC10 | |||||||
family | PTHR11346 | ||||||||
NCBI | gene | 181786 | |||||||
RefSeq | protein | NM_078443.9 | |||||||
TrEMBL | UniProtAcc | G5EC10 | |||||||
UniProt_GCRP | UniProtAcc | G5EC10 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lec | ||||||||
Allele (18) | |||||||||
Legacy_information | [Arata Y] No mutants known. Encodes predicted galectin. Predicted gene C16H3.2 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00010709 | ||||||||
00010710 | |||||||||
00010711 | |||||||||
00010712 | |||||||||
00010713 | |||||||||
00110344 | |||||||||
Ortholog (39) | |||||||||
Paralog (26) | |||||||||
Structured_description | Concise_description | lec-9 encodes a predicted lectin that affects embryonic viability. | Paper_evidence | WBPaper00004651 | |||||
Curator_confirmed | WBPerson48 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enables glycolipid binding activity. Located in cytoplasm. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C16H3.2 | |||||||
Corresponding_transcript | C16H3.2.1 | ||||||||
Other_sequence (12) | |||||||||
Associated_feature | WBsf648884 | ||||||||
WBsf655156 | |||||||||
WBsf663750 | |||||||||
WBsf663751 | |||||||||
WBsf718848 | |||||||||
WBsf1008966 | |||||||||
Experimental_info | RNAi_result | WBRNAi00028981 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010876 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00001288 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040748 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011910 | ||||||||
Expr1031339 | |||||||||
Expr1144789 | |||||||||
Expr2013042 | |||||||||
Expr2031274 | |||||||||
Drives_construct | WBCnstr00036341 | ||||||||
Construct_product | WBCnstr00036341 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (254) | |||||||||
Interaction (29) | |||||||||
Map_info | Map | X | Position | 24.5266 | Error | 0.040461 | |||
Positive | Positive_clone | C16H3 | Person_evidence | WBPerson763 | |||||
Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00004651 | ||||||||
WBPaper00006465 | |||||||||
WBPaper00032075 | |||||||||
WBPaper00034766 | |||||||||
WBPaper00037859 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00039111 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00065331 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |