WormBase Tree Display for Gene: WBGene00002266
expand all nodes | collapse all nodes | view schema
| WBGene00002266 | SMap | S_parent | Sequence | ZK892 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | lec-3 | |||||||
| Sequence_name | ZK892.1 | ||||||||
| Molecular_name (21) | |||||||||
| Other_name | CELE_ZK892.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | lec-3 | ||||||||
| DB_info | Database | AceView | gene | 2K289 | |||||
| WormQTL | gene | WBGene00002266 | |||||||
| WormFlux | gene | WBGene00002266 | |||||||
| NDB | locus_tag | CELE_ZK892.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002266|UniProtKB=Q09581 | |||||||
| family | PTHR11346 | ||||||||
| NCBI | gene | 174557 | |||||||
| RefSeq | protein | NM_001027362.7 | |||||||
| NM_001027360.6 | |||||||||
| NM_001027361.4 | |||||||||
| NM_063758.9 | |||||||||
| NM_001027363.5 | |||||||||
| NM_001276739.3 | |||||||||
| SwissProt | UniProtAcc | Q09581 | |||||||
| TrEMBL | UniProtAcc | Q8I4A5 | |||||||
| Q95ZI4 | |||||||||
| Q8I4A3 | |||||||||
| I2HAG1 | |||||||||
| Q8I4A4 | |||||||||
| UniProt_GCRP | UniProtAcc | Q09581 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lec | ||||||||
| Allele (136) | |||||||||
| Legacy_information | [Arata Y] No mutants known. Encodes predicted galectin. | ||||||||
| Strain | WBStrain00032126 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00023915 | ||||||||
| 00023916 | |||||||||
| 00023917 | |||||||||
| 00054833 | |||||||||
| 00083691 | |||||||||
| 00083692 | |||||||||
| 00083693 | |||||||||
| 00110338 | |||||||||
| Ortholog (56) | |||||||||
| Paralog (26) | |||||||||
| Structured_description | Automated_description | Predicted to enable galactoside binding activity. Located in plasma membrane. Is an ortholog of human LGALS9 (galectin 9) and LGALS9B (galectin 9B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK892.1a | |||||||
| ZK892.1b | |||||||||
| ZK892.1c | |||||||||
| ZK892.1d | |||||||||
| ZK892.1e | |||||||||
| ZK892.1f | |||||||||
| Corresponding_transcript | ZK892.1a.1 | ||||||||
| ZK892.1a.2 | |||||||||
| ZK892.1b.1 | |||||||||
| ZK892.1b.2 | |||||||||
| ZK892.1c.1 | |||||||||
| ZK892.1c.2 | |||||||||
| ZK892.1d.1 | |||||||||
| ZK892.1e.1 | |||||||||
| ZK892.1f.1 | |||||||||
| Other_sequence (36) | |||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00092608 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00059798 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022210 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038484 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022211 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9467 | ||||||||
| Expr1023824 | |||||||||
| Expr1031336 | |||||||||
| Expr1163230 | |||||||||
| Expr2013036 | |||||||||
| Expr2031268 | |||||||||
| Drives_construct | WBCnstr00036346 | ||||||||
| Construct_product | WBCnstr00014032 | ||||||||
| WBCnstr00036346 | |||||||||
| Microarray_results (49) | |||||||||
| Expression_cluster (251) | |||||||||
| Interaction (37) | |||||||||
| Map_info | Map | II | Position | 1.81897 | Error | 0.000536 | |||
| Positive | Positive_clone | ZK892 | Person_evidence | WBPerson763 | |||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026640 | ||||||||
| WBPaper00028448 | |||||||||
| WBPaper00032075 | |||||||||
| WBPaper00034766 | |||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
