WormBase Tree Display for Gene: WBGene00002268
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| WBGene00002268 | SMap | S_parent | Sequence | ZK1248 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | lec-5 | |||||||
| Sequence_name | ZK1248.16 | ||||||||
| Molecular_name | ZK1248.16 | ||||||||
| ZK1248.16.1 | |||||||||
| CE29634 | |||||||||
| Other_name | CELE_ZK1248.16 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | lec-5 | ||||||||
| DB_info | Database | AceView | gene | 2G130 | |||||
| WormQTL | gene | WBGene00002268 | |||||||
| WormFlux | gene | WBGene00002268 | |||||||
| NDB | locus_tag | CELE_ZK1248.16 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002268|UniProtKB=G5EFI4 | |||||||
| family | PTHR11346 | ||||||||
| NCBI | gene | 173992 | |||||||
| RefSeq | protein | NM_062762.11 | |||||||
| TrEMBL | UniProtAcc | G5EFI4 | |||||||
| UniProt_GCRP | UniProtAcc | G5EFI4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lec | ||||||||
| Allele (24) | |||||||||
| Legacy_information | [Arata Y] No mutants known. Encodes predicted galectin. Predicted gene ZK1248.16 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00018203 | ||||||||
| 00018204 | |||||||||
| 00018205 | |||||||||
| 00018206 | |||||||||
| 00110340 | |||||||||
| Ortholog (46) | |||||||||
| Paralog (26) | |||||||||
| Structured_description | Automated_description | Predicted to enable galactoside binding activity. Located in membrane raft. Is an ortholog of human LGALS9 (galectin 9); LGALS9B (galectin 9B); and LGALS9C (galectin 9C). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1248.16 | |||||||
| Corresponding_transcript | ZK1248.16.1 | ||||||||
| Other_sequence (136) | |||||||||
| Associated_feature | WBsf650098 | ||||||||
| WBsf650099 | |||||||||
| WBsf665561 | |||||||||
| WBsf665562 | |||||||||
| WBsf665563 | |||||||||
| WBsf665564 | |||||||||
| WBsf665565 | |||||||||
| WBsf665566 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00059188 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103650 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022513 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059187 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010566 | ||||||||
| Expr1031337 | |||||||||
| Expr1162605 | |||||||||
| Expr2013038 | |||||||||
| Expr2031270 | |||||||||
| Drives_construct | WBCnstr00036344 | ||||||||
| Construct_product | WBCnstr00036344 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (210) | |||||||||
| Interaction (76) | |||||||||
| Map_info | Map | II | Position | -0.867516 | Error | 0.002326 | |||
| Positive | Positive_clone | ZK1248 | Person_evidence | WBPerson763 | |||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032075 | ||||||||
| WBPaper00034766 | |||||||||
| WBPaper00037777 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00044448 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055339 | |||||||||
| WBPaper00057742 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
