WormBase Tree Display for CDS: C44F1.3
expand all nodes | collapse all nodes | view schema
| C44F1.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C44F1 | |||
| Structure | Source_exons | 1 | 3 | |||
| 203 | 318 | |||||
| 463 | 574 | |||||
| 620 | 997 | |||||
| 1497 | 1739 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q18625 | ||
| UniProt | UniProtAcc | Q18625 | ||||
| UniProt_GCRP | UniProtAcc | Q18625 | ||||
| AlphaFold | entry | Q18625 | ||||
| NCBI_protein | GI_number | GI:3874919 | ||||
| Protein_id | CHROMOSOME_III | CAA88850 | 1 | |||
| DB_remark | LEC-4 protein; contains similarity to Pfam domain PF00337 (Galactoside-binding lectin); contains similarity to Interpro domains IPR044156 (Galectin-like), IPR001079 (Galectin, carbohydrate recognition domain), IPR013320 (Concanavalin A-like lectin/glucanase domain superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00002267 | ||||
| Corresponding_transcript | C44F1.3.1 | |||||
| Corresponding_protein | CE02163 | |||||
| Corresponding_PCR_product | TH:320C4 | |||||
| cenix:320-c4 | ||||||
| mv_C44F1.3 | ||||||
| sjj_C44F1.3 | ||||||
| smd_C44F1.3 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (88) | ||||||
| RNAi_result | WBRNAi00011953 | |||||
| WBRNAi00042492 | ||||||
| WBRNAi00006002 | ||||||
| WBRNAi00092920 | ||||||
| WBRNAi00029813 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Galectin | Accession_evidence | UniProt | TR:Q18625 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf000021 | |||||
| Method | curated |
