WormBase Tree Display for Gene: WBGene00002267
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| WBGene00002267 | SMap | S_parent | Sequence | C44F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | lec-4 | |||||||
| Sequence_name | C44F1.3 | ||||||||
| Molecular_name | C44F1.3 | ||||||||
| C44F1.3.1 | |||||||||
| CE02163 | |||||||||
| Other_name | CELE_C44F1.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | lec-4 | ||||||||
| DB_info | Database | AceView | gene | 3E862 | |||||
| WormQTL | gene | WBGene00002267 | |||||||
| WormFlux | gene | WBGene00002267 | |||||||
| NDB | locus_tag | CELE_C44F1.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002267|UniProtKB=Q18625 | |||||||
| family | PTHR11346 | ||||||||
| NCBI | gene | 175488 | |||||||
| RefSeq | protein | NM_065362.9 | |||||||
| TrEMBL | UniProtAcc | Q18625 | |||||||
| UniProt_GCRP | UniProtAcc | Q18625 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lec | ||||||||
| Allele (34) | |||||||||
| Legacy_information | [Arata Y] No mutants known. Encodes predicted galectin. Predicted gene C44F1.3 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00061868 | ||||||||
| 00061869 | |||||||||
| 00061870 | |||||||||
| 00061871 | |||||||||
| 00061872 | |||||||||
| 00110339 | |||||||||
| Ortholog (42) | |||||||||
| Paralog (28) | |||||||||
| Structured_description | Concise_description | lec-4 encodes a predicted galectin that exhibits sugar binding properties in vitro. | Paper_evidence | WBPaper00004274 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables galactoside binding activity. Located in membrane raft. Is an ortholog of human LGALS9 (galectin 9) and LGALS9B (galectin 9B). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C44F1.3 | |||||||
| Corresponding_transcript | C44F1.3.1 | ||||||||
| Other_sequence (192) | |||||||||
| Associated_feature | WBsf650931 | ||||||||
| WBsf991899 | |||||||||
| WBsf991900 | |||||||||
| WBsf991901 | |||||||||
| WBsf1014631 | |||||||||
| WBsf1014632 | |||||||||
| WBsf226390 | |||||||||
| WBsf226391 | |||||||||
| WBsf226392 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011953 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042492 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006002 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092920 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029813 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025418 | ||||||||
| Expr1146479 | |||||||||
| Expr2013037 | |||||||||
| Expr2031269 | |||||||||
| Drives_construct | WBCnstr00036345 | ||||||||
| Construct_product | WBCnstr00036345 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (213) | |||||||||
| Interaction | WBInteraction000538828 | ||||||||
| WBInteraction000540312 | |||||||||
| WBInteraction000552309 | |||||||||
| WBInteraction000552501 | |||||||||
| WBInteraction000560845 | |||||||||
| WBInteraction000561989 | |||||||||
| WBInteraction000564012 | |||||||||
| WBInteraction000567096 | |||||||||
| WBInteraction000568248 | |||||||||
| Map_info | Map | III | Position | -4.25302 | Error | 0.000245 | |||
| Positive | Positive_clone | C44F1 | Person_evidence | WBPerson763 | |||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004274 | ||||||||
| WBPaper00032075 | |||||||||
| WBPaper00034766 | |||||||||
| WBPaper00037777 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
