WormBase Tree Display for Gene: WBGene00000399

WBGene00000399 SMap: S_parent: Sequence: R05H10
  Identity: Version: 1
    Name: CGC_name: cdh-7 Person_evidence: WBPerson698
      Sequence_name: R05H10.6
      Molecular_name: R05H10.6
        R05H10.6.1
        CE38092
      Other_name: CELE_R05H10.6 Accession_evidence: NDB BX284602
      Public_name: cdh-7
    DB_info: Database: AceView gene 2P135
        WormQTL gene WBGene00000399
        WormFlux gene WBGene00000399
        NDB locus_tag CELE_R05H10.6
        Panther gene CAEEL|WormBase=WBGene00000399|UniProtKB=O62328
          family PTHR24026
        NCBI gene 175143
        RefSeq protein NM_064674.6
        TrEMBL UniProtAcc O62328
        UniProt_GCRP UniProtAcc O62328
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cdh
    Allele (160)
    Strain: WBStrain00031423
    RNASeq_FPKM (74)
    GO_annotation: 00037710
      00037711
      00037712
      00107331
      00107332
      00107333
      00107334
    Ortholog: WBGene00032243 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00163638 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00062201 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00192922 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00055323 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00130497 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g12384 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g10593 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8060 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g20031 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g27229 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4976 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6506 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g12048 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g1840 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23635 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00375.g9972 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-cdh-7 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12649 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02120.g24955 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10952 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_004626 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_20160000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g6621 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00216657 Caenorhabditis japonica From_analysis: WormBase-Compara
    Paralog: WBGene00000397 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00019994 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000395 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000396 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000401 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000402 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017576 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00022103 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Predicted to be involved in homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in plasma membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R05H10.6
    Corresponding_CDS_history: R05H10.6:wp128
      R05H10.6:wp139
    Corresponding_transcript: R05H10.6.1
    Other_sequence: CJC04923_1
      CJC14481_1
    Associated_feature: WBsf981371
      WBsf990838
      WBsf990839
      WBsf1013915
      WBsf1013916
      WBsf222514
  Experimental_info: RNAi_result (3)
    Expr_pattern: Expr1019067
      Expr1155032
      Expr2028044
    Drives_construct: WBCnstr00037569
    Construct_product: WBCnstr00037569
    Microarray_results (20)
    Expression_cluster (223)
    Interaction (47)
  Map_info: Map: II Position: 23.6184 Error: 0.024266
    Positive: Positive_clone: R05H10 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4193
    Pseudo_map_position
  Reference (7)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene