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WormBase Tree Display for Gene: WBGene00012144

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Name Class

WBGene00012144SMapS_parentSequenceCHROMOSOME_V
IdentityVersion2
NameCGC_namelgmn-1Person_evidenceWBPerson56
Author_evidenceH. Kadota
Sequence_nameT28H10.3
Molecular_nameT28H10.3
T28H10.3.1
CE14367
Other_nameCELE_T28H10.3Accession_evidenceNDBBX284605
Public_namelgmn-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
211 Mar 2021 09:37:10WBPerson1983Name_changeCGC_namelgmn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlgmn
Allele (39)
RNASeq_FPKM (74)
GO_annotation (15)
Ortholog (37)
ParalogWBGene00011482Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable cysteine-type endopeptidase activity. Involved in PERK-mediated unfolded protein response. Predicted to be located in vacuole. Is an ortholog of human LGMN (legumain).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST28H10.3
Corresponding_transcriptT28H10.3.1
Other_sequence (139)
Associated_featureWBsf647381
WBsf661908
WBsf232663
Experimental_infoRNAi_resultWBRNAi00076725Inferred_automaticallyRNAi_primary
WBRNAi00054448Inferred_automaticallyRNAi_primary
WBRNAi00089172Inferred_automaticallyRNAi_primary
WBRNAi00001579Inferred_automaticallyRNAi_primary
WBRNAi00036107Inferred_automaticallyRNAi_primary
WBRNAi00019417Inferred_automaticallyRNAi_primary
Expr_patternExpr10444
Expr10445
Expr1010916
Expr1035372
Expr1157992
Expr2006638
Expr2024855
Drives_constructWBCnstr00015333
WBCnstr00030108
Construct_product (2)
Microarray_results (23)
Expression_clusterWBPaper00005700:secreted_protein
WBPaper00030922:glycosylated_protein
WBPaper00032425:down_in_rde-4
WBPaper00032425:down_in_zfp-1
WBPaper00033065:clk-1(qm30)_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037849:sam-10(js94)_upregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_CoreEnriched
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:pharyngeal-muscle_embryo_enriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038213:E.coli(LF82)_24h_upregulated
WBPaper00038289:oocyte_protein
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00040134:nhr-49(RNAi)_regulated_protein
WBPaper00040990:PA14_upregulated
WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044030:nhr-8(hd117)_upregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044260:1-methylnicotinamide_downregulated
WBPaper00044260:nicotic-acid_downregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044743:wdr-23_neuron_upregulated
WBPaper00044746:aging_upregulated_HeatShock
WBPaper00045314:S.aureus-induced_N2
WBPaper00045390:tunicamycin_downregulated
WBPaper00045390:ubc-9(RNAi)_downregulated
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00045934:wrn-1(gk99)_downregulated
WBPaper00046121:endoderm_unique
WBPaper00046337:monosomal_N2_vs_daf-2_downregulated
WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_downregulated
WBPaper00046337:polysomal_N2_vs_daf-2_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00046497:B.thuringiensis_upregulated_protein
WBPaper00046858:elt-2(RNAi)_upregulated
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00048952:glucose_repressed
WBPaper00048988:neuron_expressed
WBPaper00049018:ham-3(RNAi)_downregulated
WBPaper00049334:CE_intestine_enriched
WBPaper00049498:npr-1(ur89)_regulated_5
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
WBPaper00049905:Age_variant_expression
WBPaper00049942:HeatShock_downregulated_hsf-1(+)
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00049954:BPA_upregulated
WBPaper00050080:rbr-2(tm3141)_upregulated
WBPaper00050109:rBmTX14_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
WBPaper00050332:skn-1(RNAi)_downregulated
WBPaper00050344:ASER-neuron_enriched
WBPaper00050448:KGB-1-induced
WBPaper00050468:hlh-30-dependent_Cry5B_regulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051039:ash-2(RNAi)_regulated_intestine
WBPaper00051039:intestine_enriched
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051257:Levamisole_upregulated
WBPaper00051265:F4_hrde-1(tm1200)_downregulated
WBPaper00051371:Orsay-virus-infection_upregulated_rde-1(ne219)
WBPaper00051388:Glucose-diet_upregulated
WBPaper00051404:alg-5(ram2)_downregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053020:sid-3(ok973)_upregulated
WBPaper00053020:sta-1(ok587)_upregulated
WBPaper00053140:DecreasingResponse_20nmAgCit
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053318:Aging_upregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_upregulated_mRNA
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053599:female_vs_male_downregulated
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
WBPaper00053615:SMO-1_target
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053771:up_at_24h-NaCl
WBPaper00053798:nhr-49(nr2041)_tBOOH_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053814:OP50_vs_PY79_downregulated_PY79
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055049:S.gordonii_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00055804:FBF-1-FBF-2-associated_oogenic-enriched
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056034:pals-25(jy9)_upregulated
WBPaper00056073:R24_upregulated_nhr-86_dependent
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056165:mina-1(ok1521)_downregulated_transcript
WBPaper00056167:ifo-1(kc2)_downregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay1
WBPaper00056586:kri-1(ok1251)_upregulated
WBPaper00056826:hmc_biased
WBPaper00056868:P.aeruginosa_upregulated_smallRNA
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057288:Cold_downregulated_protein
WBPaper00057288:iff-1(RNAi)_upregulated_protein
WBPaper00057347:nhr-14(tm1473)_upreglated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059373:stt-3(RNAi)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059739:hira-1(gk835598)_upregulated_adult
WBPaper00059763:neuron_expressed
WBPaper00059839:S.maltophilia_regulated
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060084:cco-1(RNAi)_upregulated_N2
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_N2
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060526:plp-1(ok2155)_downregulated
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060871:M.humicola-infection_24h_regulated
WBPaper00060909:atfs-1(et18)_upregulated
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00060911:prx-5(RNAi)_upregulated_protein
WBPaper00061007:HB101_upregulated
WBPaper00061007:M.braciatum_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061007:X.citri_upregulated
WBPaper00061045:Y56A3A.22(cck200)_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
WBPaper00061199:GYF-1_interacting
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:Intestine
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061409:neuronal-fzo-1(RNAi)_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061527:C32F10.4-D1086.2
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062184:PA14_upregulated
WBPaper00062237:dnj-21(RNAi)_upregulated_protein
WBPaper00062293:isp-1(qm150)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062440:crh-1(syb385)_downregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062456:doxycycline_downregulated_CB4856_protein
WBPaper00062554:MAGU-2_interacting
WBPaper00062590:Aging_upregulated_neuron
WBPaper00062669:extracellular-vesicle_protein
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00062684:pathogen_upregulated_N2
WBPaper00064055:trl-1(cas1077)_downregulated_starved
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064163:ZNFX-1_interacting_embryo
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064632:daf-2(e1370)_upregulated_intestine
WBPaper00064637:cox-5B(RNAi)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064735:bet-1(RNAi)_vs_N2_upregulated
WBPaper00064735:bet-1(uth41)_vs_N2_upregulated
WBPaper00064788:ketamine_upregulated
WBPaper00064871:hypoxia_downregulated_F3
WBPaper00064871:PA14_upregulated_AWA
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00064933:E.coli-binding_secret_protein
WBPaper00064939:vit-5(RNAi)_upregulated
WBPaper00064952:Day10_vs_Day1_upregulated_20C
WBPaper00064952:Day10_vs_L4_upregulated_20C
WBPaper00064952:Day10_vs_L4_upregulated_25C
WBPaper00065029:cadmium_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065272:dhgd-1(tm6671)_upregulated
WBPaper00065288:mdt-15(tm2182)_upregulated
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_Ref
WBPaper00065734:unc-25(e156)_upregulated
WBPaper00065749:endu-2(tm4977)_upregulated
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065841:2_0
WBPaper00065841:3_1
WBPaper00065841:3_2
WBPaper00065841:3_5
WBPaper00065841:26_2
WBPaper00065841:107_0
WBPaper00065877:rege-1(imm070)_upregulated_OP50
WBPaper00065945:epidermis-rpoa-2(-)_upregulated_protein
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4386_cluster_2_3
cgc4489_group_12
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
WBPaper00025032:cluster_37
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026952:class_E
WBPaper00026980:intestine_enriched
WBPaper00029437:dcr-1_upregulated
WBPaper00029437:rde-4_upregulated
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00030985:Erwinia_carotovora_upregulated
WBPaper00030985:Photorhabdus_luminescens_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00031060:2-deoxy-D-glucose_upregulated
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_4
WBPaper00033101:spr-5_regulated
WBPaper00034739:N2moreDR1350
WBPaper00034757:up_by_oxidative_stress
WBPaper00035588:alg-1(-)_upregulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-11_regulated
WBPaper00036123:Fluoranthene_regulated
WBPaper00036286:Pattern_D
WBPaper00037695:WC_5-day
WBPaper00038060:SUMO-1_downregulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00038304:octr-1_regulated
WBPaper00039851:Live_C_albicans_vs_HK_OP50
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041960:N2_fasting_upregulated_9hto12h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042128:gei-8(ok1671)_upregulated
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00044013:nasp-1_downregulated
WBPaper00044091:Bpseudomallei_induced_2h
WBPaper00045015:acs-3(ft5)_upregulated
WBPaper00045015:nhr-25(RNAi)_upregulated
WBPaper00045673:colistin_upregulated
WBPaper00045865:biofilm_upregulated_A
WBPaper00045960:L4-lethargus_upregulated
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
WBPaper00047070:DAF-16-dependent_UV_response
WBPaper00047070:N2_starvation_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00050515:nipi-3(fr4)_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:cluster_12
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(143_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SE_pi(143_min)
Interaction (162)
Map_infoMapVPosition4.43767
PositivePositive_cloneT28H10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00059755
WBPaper00062690
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene