WormBase Tree Display for Expression_cluster: WBPaper00046497:B.thuringiensis_upregulated_protein
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| WBPaper00046497:B.thuringiensis_upregulated_protein | Description | Proteins that showed significantly increased expression after pathogenic bacteria Bacillus thuringiensis infections comparing to non pathogenic BT, according to proteomic studies via isobaric labelling and 2D-LS-MS/MS. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Quantitative results of log2 transformed iTRAQ-protein ratios describing the condition pathogenic/non-pathogenic BT were tested against all log2 transformed control-ratios of biological replicates in the same iTRAQ experiment using the two sided Welchs t-test. To adjust for multiple testing, p-values were corrected by permutation based FDR approach with 1000 randomizations. Protein groups with log2 ratios of at least +/- 0.485 (which corresponds to iTRAQ-ratios >= 1.4 or <= 0.71) with FDR-corrected p-value <= 0.05 were considered to be differentially expressed. | ||
| Reference | WBPaper00046497 | ||
| WBPaper00046131 | |||
| Based_on_WB_Release | 235 | ||
| Gene (170) | |||
| Attribute_of | Mass_spectrometry | ||
| Regulation | Regulated_by_treatment | Bacteria infection: Bacillus thuringiensis | |
| Remark | Type: Bacteria Infection |
