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WormBase Tree Display for Gene: WBGene00014164

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Name Class

WBGene00014164SMapS_parentSequenceZK945
IdentityVersion2
NameCGC_namelact-2Person_evidenceWBPerson168
Sequence_nameZK945.1
Molecular_nameZK945.1
ZK945.1.1
CE01731
Other_nameCELE_ZK945.1Accession_evidenceNDBBX284602
Public_namelact-2
DB_infoDatabaseAceViewgene2K387
WormQTLgeneWBGene00014164
WormFluxgeneWBGene00014164
NDBlocus_tagCELE_ZK945.1
PanthergeneCAEEL|WormBase=WBGene00014164|UniProtKB=Q09621
familyPTHR43319
NCBIgene174570
RefSeqproteinNM_063775.5
SwissProtUniProtAccQ09621
TREEFAMTREEFAM_IDTF315291
UniProt_GCRPUniProtAccQ09621
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
213 Apr 2007 16:02:30WBPerson2970Name_changeCGC_namelact-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlact
Allele (58)
RNASeq_FPKM (74)
GO_annotation00055122
00055123
OrthologWBGene00113453Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00034176Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00053733Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00143519Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00142701Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00211553Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00133096Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00227854Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g12868Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g977Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14362Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8012Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20076Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g27319Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4391Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9201Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g28974Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g4972Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00736.g13786Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7945Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00609.g13519Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_12765Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005161Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12760Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13560Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20209400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5658Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00248009Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00099772Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00267015Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00007358Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010877Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00010897Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018523Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016355Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000767Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008410Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021315Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionlact-2 encodes a beta-lactamase domain-containing protein that contains a predicted transmembrane domain in its N terminus.Curator_confirmedWBPerson1843
Date_last_updated18 Dec 2007 00:00:00
Automated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK945.1
Corresponding_transcriptZK945.1.1
Other_sequence (64)
Associated_feature (20)
Experimental_infoRNAi_resultWBRNAi00089232Inferred_automaticallyRNAi_primary
WBRNAi00002283Inferred_automaticallyRNAi_primary
WBRNAi00022241Inferred_automaticallyRNAi_primary
WBRNAi00059845Inferred_automaticallyRNAi_primary
WBRNAi00038507Inferred_automaticallyRNAi_primary
Expr_patternExpr1024115
Expr1036345
Expr1163274
Expr2012994
Expr2031226
Drives_constructWBCnstr00029259
Construct_productWBCnstr00029259
Microarray_results (19)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00035269:cde-1_regulated
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00044736:oscillating_dev_expression
WBPaper00045314:S.aureus-induced_hlh-30(tm1978)
WBPaper00045314:S.aureus-induced_N2
WBPaper00045417:128Q-huntingtin_downreglated
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00046024:sleep_upregulated_oscillating
WBPaper00046499:AMPK_regulated
WBPaper00048988:neuron_expressed
WBPaper00049217:TCER-1_upregulated
WBPaper00049495:starvation-refeeding_regulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
WBPaper00050121:mir-60(n4947)_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_100-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
WBPaper00050332:skn-1(RNAi)_downregulated
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051039:intestine_enriched
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053318:Aging_upregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_upregulated_mRNA
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053814:25C_upregulated_OP50
WBPaper00055354:Rifampicin_downregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055827:daf-2(e1370)_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056034:pals-25(jy9)_upregulated
WBPaper00056039:ptrn-1(tm5597)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056284:ints-2(RNAi)_downregulated
WBPaper00056293:rpl-5(0)-rpl-33(0)_downregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056826:SGP_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057068:ints-4(RNAi)_downregulated
WBPaper00057143:ztf-11(RNAi)_upregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058665:graphene-oxide_upregulated_mRNA
WBPaper00058678:DAF-12_downregulated_PVD
WBPaper00058711:paraquat_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059471:EGL-43_interacting
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060871:M.humicola-extract_4h_regulated
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061007:X.citri_upregulated
WBPaper00061045:Y56A3A.22(cck200)_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:ADEsh
WBPaper00061340:ant_arc_V
WBPaper00061340:CEPsh
WBPaper00061340:CEPso
WBPaper00061340:hyp1_hyp2
WBPaper00061340:ILsh_OLLsh_OLQsh
WBPaper00061341:28C_24h_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061527:C32F10.4-D1086.2
WBPaper00061651:CEPsh_enriched
WBPaper00061699:daf-18(ok480)_downregulated
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062184:PA14_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062305:P.brevicompactum_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_downregulated
WBPaper00064494:postdauer_downregulated_WholeAnimal
WBPaper00064632:daf-2(e1370)_upregulated_intestine
WBPaper00064716:paraquat_downregulated
WBPaper00064871:hypoxia_downregulated_F3
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065392:Lb.gasseri_downregulated
WBPaper00065392:Lb.plantarum_downregulated
WBPaper00065581:hpk-1(pk1393)_downregulated
WBPaper00065841:5_0
WBPaper00065841:5_1
WBPaper00065841:33_0
WBPaper00065841:33_1
WBPaper00065841:37_0
WBPaper00065841:141_0
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4386_cluster_2_1
cgc4489_group_21
WBPaper00025099:MA_specific
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:Resveratrol_regulated_N2
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026952:class_E
WBPaper00026980:intestine_enriched
WBPaper00027111:rde-3(r459)_upregulated
WBPaper00029437:dcr-1_upregulated
WBPaper00029437:rde-4_upregulated
WBPaper00030985:Photorhabdus_luminescens_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031850:mdt-15(RNAi)_downregulated
WBPaper00032165:differentially_expressed_with_age_medoid_4
WBPaper00032948:FedUp
WBPaper00034757:up_by_oxidative_stress
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-11_regulated
WBPaper00035873:osmotically_regulated
WBPaper00036123:Atrazine_regulated
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_D
WBPaper00038060:SUMO-1_downregulated
WBPaper00038304:octr-1_regulated
WBPaper00040823:alg-1(gk214)_upregulated
WBPaper00040876:mir-35_downregulated
WBPaper00040963:TA200_down
WBPaper00040963:TA300_up
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_0.2mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00041960:N2_fasting_upregulated_9hto12h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00048637:lin-35(n745)_starvation_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00057098:SiO2-nanoparticles_upregulated
Interaction (39)
Map_infoMapIIPosition1.88066Error0.003089
PositivePositive_cloneZK945Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00053423
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene