WormBase Tree Display for Gene: WBGene00007358

WBGene00007358 SMap: S_parent: Sequence: C06A12
  Identity: Version: 2
    Name: CGC_name: lact-6 Person_evidence: WBPerson168
      Sequence_name: C06A12.5
      Molecular_name: C06A12.5
        C06A12.5.1
        CE18489
      Other_name: CELE_C06A12.5 Accession_evidence: NDB BX284604
      Public_name: lact-6
    DB_info: Database: AceView gene 4S374
        WormQTL gene WBGene00007358
        WormFlux gene WBGene00007358
        NDB locus_tag CELE_C06A12.5
        Panther gene CAEEL|WormBase=WBGene00007358|UniProtKB=Q9XU43
          family PTHR43319
        NCBI gene 182288
        RefSeq protein NM_070708.6
        TREEFAM TREEFAM_ID TF315291
        TrEMBL UniProtAcc Q9XU43
        UniProt_GCRP UniProtAcc Q9XU43
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 13 Apr 2007 16:02:30 WBPerson2970 Name_change: CGC_name: lact-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lact
    Allele (38)
    RNASeq_FPKM (74)
    Ortholog (29)
    Paralog: WBGene00018523 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00010877 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00010897 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00014164 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00016355 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00000767 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008410 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021315 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: lact-6 encodes a beta-lactamase domain-containing protein that contains a predicted signal sequence in its N terminus. Curator_confirmed: WBPerson1843
          Date_last_updated: 18 Dec 2007 00:00:00
      Automated_description: Enriched in Y cell and intestine based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including let-60; daf-12; and eat-2 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including methylmercury hydroxide; methylmercuric chloride; and multi-walled carbon nanotube based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Beta-lactamase-related; Beta-lactamase; and Beta-lactamase/transpeptidase-like. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C06A12.5
    Corresponding_transcript: C06A12.5.1
    Other_sequence (24)
    Associated_feature: WBsf668589
  Experimental_info: RNAi_result: WBRNAi00028530 Inferred_automatically: RNAi_primary
      WBRNAi00039814 Inferred_automatically: RNAi_primary
      WBRNAi00010261 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010530
      Expr1143895
      Expr2012998
      Expr2031230
    Drives_construct: WBCnstr00033803
    Construct_product: WBCnstr00033803
    Microarray_results (18)
    Expression_cluster (142)
    Interaction: WBInteraction000172291
      WBInteraction000430691
      WBInteraction000443677
      WBInteraction000455357
      WBInteraction000455358
      WBInteraction000464144
      WBInteraction000465205
      WBInteraction000471213
  Map_info: Map: IV Position: 16.9289 Error: 0.036594
    Positive: Positive_clone: C06A12 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene