WormBase Tree Display for Expression_cluster: WBPaper00044426:rotenone_5day_upregulated
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| WBPaper00044426:rotenone_5day_upregulated | Description | Genes with increased RNA expression after 5 days of rotenone treatment | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | EdgeR provides statistical routines for determining differential expression in digital gene expression data using a model based on the negative binomial distribution. The resulting p-values were adjusted using the Benjamini and Hochbergs approach for controlling the false discovery rate (FDR). Transcripts with an adjusted p-value smaller 0.05 were assigned as differentially expressed. | ||
| Reference | WBPaper00044426 | ||
| Based_on_WB_Release | 220 | ||
| Gene | WBGene00012664 | Fold change: 0.465963, p_value: 0.037354 | |
| WBGene00013859 | Fold change: 0.653898, p_value: 0.002164 | ||
| WBGene00016340 | Fold change: 0.62274, p_value: 0.001627 | ||
| WBGene00022287 | Fold change: 0.699757, p_value: 0.013279 | ||
| WBGene00012323 | Fold change: 0.97991, p_value: 0.000006 | ||
| WBGene00009397 | Fold change: 0.59642, p_value: 0.006401 | ||
| WBGene00008043 | Fold change: 0.67697, p_value: 0.004752 | ||
| WBGene00011486 | Fold change: 0.605815, p_value: 0.002587 | ||
| WBGene00004397 | Fold change: 0.629758, p_value: 0.004302 | ||
| WBGene00000606 | Fold change: 0.655067, p_value: 0.001333 | ||
| WBGene00018267 | Fold change: 0.978962, p_value: 0.022267 | ||
| WBGene00019975 | Fold change: 0.701058, p_value: 0.009262 | ||
| WBGene00019089 | Fold change: 0.983588, p_value: 0.00624 | ||
| WBGene00008621 | Fold change: 0.688103, p_value: 0.000633 | ||
| WBGene00009778 | Fold change: 0.698762, p_value: 0.002931 | ||
| WBGene00005016 | Fold change: 0.522793, p_value: 0.022953 | ||
| WBGene00021160 | Fold change: 0.534261, p_value: 0.039424 | ||
| WBGene00022261 | Fold change: 0.580088, p_value: 0.007842 | ||
| WBGene00021873 | Fold change: 1.294421, p_value: 0 | ||
| WBGene00044554 | Fold change: 0.840893, p_value: 0.033402 | ||
| WBGene00008560 | Fold change: 0.795221, p_value: 0.000664 | ||
| WBGene00009898 | Fold change: 1.417238, p_value: 0 | ||
| WBGene00009902 | Fold change: 0.572809, p_value: 0.006818 | ||
| WBGene00000668 | Fold change: 0.616955, p_value: 0.033075 | ||
| WBGene00007867 | Fold change: 0.508592, p_value: 0.021863 | ||
| WBGene00019017 | Fold change: 0.549091, p_value: 0.008177 | ||
| WBGene00008349 | Fold change: 1.295104, p_value: 0.002587 | ||
| WBGene00005444 | Fold change: 0.747007, p_value: 0.00071 | ||
| WBGene00004622 | Fold change: 3.158803, p_value: 0 | ||
| WBGene00004567 | Fold change: 1.115618, p_value: 0 | ||
| WBGene00004677 | Fold change: 2.956425, p_value: 0 | ||
| WBGene00045316 | Fold change: 0.790743, p_value: 0.042857 | ||
| WBGene00000785 | Fold change: 0.80243, p_value: 0.000006 | ||
| WBGene00011676 | Fold change: 0.546681, p_value: 0.044056 | ||
| WBGene00000665 | Fold change: 0.479079, p_value: 0.046 | ||
| WBGene00000609 | Fold change: 0.471798, p_value: 0.035993 | ||
| Attribute_of | RNASeq | ||
| Regulation | Regulated_by_molecule | WBMol:00004310 |
