WormBase Tree Display for Gene: WBGene00005444
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| WBGene00005444 | SMap | S_parent | Sequence | CHROMOSOME_V | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | CGC_name | srh-237 | Person_evidence | WBPerson522 | ||||||
| Sequence_name | T05E12.7 | |||||||||
| Molecular_name | T05E12.7a | |||||||||
| T05E12.7a.1 | ||||||||||
| CE16350 | ||||||||||
| T05E12.7c | ||||||||||
| CE47752 | ||||||||||
| T05E12.7b | ||||||||||
| T05E12.7c.1 | ||||||||||
| Other_name | CELE_T05E12.7 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | srh-237 | |||||||||
| DB_info | Database | AceView | gene | 5R571 | ||||||
| WormQTL | gene | WBGene00005444 | ||||||||
| NDB | locus_tag | CELE_T05E12.7 | ||||||||
| Panther | gene | CAEEL|WormBase=WBGene00005444|UniProtKB=J7SA46 | ||||||||
| family | PTHR22941 | |||||||||
| NCBI | gene | 13217708 | ||||||||
| RefSeq | protein | NM_001276982.3 | ||||||||
| NR_102105.1 | ||||||||||
| NM_001276981.5 | ||||||||||
| TrEMBL | UniProtAcc | J7SF85 | ||||||||
| J7SA46 | ||||||||||
| UniProt_GCRP | UniProtAcc | J7SA46 | ||||||||
| RNAcentral | URSid | URS000046D9E8 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 13 Aug 2012 10:24:40 | WBPerson4025 | Event | Changed_class | Pseudogene | CDS | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Gene_class | srh | |||||||||
| Allele (102) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| GO_annotation | 00023989 | |||||||||
| Ortholog (19) | ||||||||||
| Paralog (292) | ||||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | T05E12.7a | ||||||||
| T05E12.7c | ||||||||||
| Corresponding_CDS_history | T05E12.7:wp104 | |||||||||
| T05E12.7a:wp240 | ||||||||||
| Corresponding_transcript | T05E12.7b | |||||||||
| T05E12.7a.1 | ||||||||||
| T05E12.7c.1 | ||||||||||
| Corresponding_pseudogene_history | T05E12.7:wp233 | |||||||||
| Other_sequence | FG647790.1 | |||||||||
| Associated_feature | WBsf647649 | |||||||||
| WBsf1002596 | ||||||||||
| Experimental_info | RNAi_result | WBRNAi00018239 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00052524 | Inferred_automatically | RNAi_primary | ||||||||
| Expr_pattern | Expr2016445 | |||||||||
| Expr2034648 | ||||||||||
| Microarray_results (13) | ||||||||||
| Expression_cluster (167) | ||||||||||
| Interaction | WBInteraction000571196 | |||||||||
| Map_info | Map | V | Position | 12.7425 | Error | 0.023812 | ||||
| Positive | Positive_clone | T05E12 | Inferred_automatically | From CDS info | ||||||
| From sequence, transcript, pseudogene data | ||||||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00026594 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
