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WormBase Tree Display for Gene: WBGene00019154

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Name Class

WBGene00019154SMapS_parentSequenceH04M03
IdentityVersion2
NameCGC_nameglf-1Paper_evidenceWBPaper00025248
Sequence_nameH04M03.4
Molecular_nameH04M03.4
H04M03.4.1
CE38614
Other_nameCELE_H04M03.4Accession_evidenceNDBBX284604
Public_nameglf-1
DB_infoDatabaseAceViewgene4G653
WormQTLgeneWBGene00019154
WormFluxgeneWBGene00019154
NDBlocus_tagCELE_H04M03.4
PanthergeneCAEEL|WormBase=WBGene00019154|UniProtKB=G5ECS4
familyPTHR42923
NCBIgene177358
RefSeqproteinNM_068483.5
TREEFAMTREEFAM_IDTF318619
TrEMBLUniProtAccG5ECS4
UniProt_GCRPUniProtAccG5ECS4
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
216 Oct 2006 14:11:34WBPerson2970Name_changeCGC_nameglf-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classglf
Allele (44)
StrainWBStrain00036541
WBStrain00004715
WBStrain00004716
RNASeq_FPKM (74)
GO_annotation00012419
00012420
00012421
00012422
00012423
00012424
00124063
Ortholog (34)
ParalogWBGene00000137Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000138Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000139Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00005010Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011615Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016061Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionglf-1 encodes a UDP-galactopyranose mutase predicted to synthesize galactofuranose (Gal(f)) as a nucleotide sugar (UDP-Gal(f)); recombinant GLF-1 has biochemical activity either in vivo (expressed in E. coli) or in vitro; orthologs of GLF-1 are found in the urochordates Halocynthia and Ciona.Paper_evidenceWBPaper00025248
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated28 Oct 2009 00:00:00
Automated_descriptionEnables UDP-galactopyranose mutase activity. Involved in polysaccharide biosynthetic process. Located in cytoplasm. Expressed in hypodermis; muscle cell; and neurons.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSH04M03.4
Corresponding_CDS_historyH04M03.4:wp143
Corresponding_transcriptH04M03.4.1
Other_sequence (49)
Associated_featureWBsf996618
WBsf1017440
WBsf228345
WBsf228346
WBsf228347
Experimental_infoRNAi_result (18)
Expr_patternExpr3373
Expr3388
Expr8791
Expr8792
Expr1020447
Expr1038270
Expr1153036
Expr2012091
Expr2030327
Drives_constructWBCnstr00005811
WBCnstr00005812
WBCnstr00005813
WBCnstr00011370
WBCnstr00013528
WBCnstr00026022
Construct_productWBCnstr00005811
WBCnstr00005812
WBCnstr00005813
WBCnstr00013528
WBCnstr00026022
Microarray_results (19)
Expression_cluster (306)
InteractionWBInteraction000007854
WBInteraction000105074
WBInteraction000107010
WBInteraction000109116
WBInteraction000109478
WBInteraction000109625
WBInteraction000109831
WBInteraction000111179
WBInteraction000112956
WBInteraction000113544
WBInteraction000114854
WBInteraction000118965
WBInteraction000119190
WBInteraction000121611
WBInteraction000122474
WBInteraction000124055
WBInteraction000124706
WBInteraction000124735
WBInteraction000125921
WBInteraction000126032
WBInteraction000127005
WBInteraction000134960
WBInteraction000135445
WBInteraction000137200
WBInteraction000137578
WBInteraction000138476
WBInteraction000138957
WBInteraction000139202
WBInteraction000139322
WBInteraction000139535
WBInteraction000141694
WBInteraction000143113
WBInteraction000144486
WBInteraction000146568
WBInteraction000146829
WBInteraction000147144
WBInteraction000147860
WBInteraction000152100
WBInteraction000156520
WBInteraction000160347
WBInteraction000160780
WBInteraction000162786
WBInteraction000164122
WBInteraction000166605
WBInteraction000168688
WBInteraction000168968
WBInteraction000170876
WBInteraction000171447
WBInteraction000172400
WBInteraction000175715
WBInteraction000177433
WBInteraction000180270
WBInteraction000180323
WBInteraction000182163
WBInteraction000185012
WBInteraction000187984
WBInteraction000188326
WBInteraction000190584
WBInteraction000190738
WBInteraction000194155
WBInteraction000195336
WBInteraction000199655
WBInteraction000200012
WBInteraction000203455
WBInteraction000203466
WBInteraction000205116
WBInteraction000206704
WBInteraction000209262
WBInteraction000211103
WBInteraction000212781
WBInteraction000213394
WBInteraction000213661
WBInteraction000214348
WBInteraction000217309
WBInteraction000219548
WBInteraction000220828
WBInteraction000222177
WBInteraction000223799
WBInteraction000232821
WBInteraction000235385
WBInteraction000235508
WBInteraction000236163
WBInteraction000237278
WBInteraction000241749
WBInteraction000245523
WBInteraction000250387
WBInteraction000251060
WBInteraction000253522
WBInteraction000256526
WBInteraction000257523
WBInteraction000257596
WBInteraction000260864
WBInteraction000261647
WBInteraction000268978
WBInteraction000276928
WBInteraction000277193
WBInteraction000278651
WBInteraction000279516
WBInteraction000285140
WBInteraction000296215
WBInteraction000299959
WBInteraction000300555
WBInteraction000303985
WBInteraction000304935
WBInteraction000308609
WBInteraction000312903
WBInteraction000313912
WBInteraction000315303
WBInteraction000315857
WBInteraction000321213
WBInteraction000331810
WBInteraction000334402
WBInteraction000335012
WBInteraction000341697
WBInteraction000342417
WBInteraction000342978
WBInteraction000344706
WBInteraction000344863
WBInteraction000345576
WBInteraction000345646
WBInteraction000346254
WBInteraction000346326
WBInteraction000349324
WBInteraction000352267
WBInteraction000355625
WBInteraction000358661
WBInteraction000365748
WBInteraction000373547
WBInteraction000373980
WBInteraction000374008
WBInteraction000379034
WBInteraction000382299
WBInteraction000385107
WBInteraction000392117
WBInteraction000393089
WBInteraction000400805
WBInteraction000401141
WBInteraction000404508
WBInteraction000407419
WBInteraction000407965
WBInteraction000413016
WBInteraction000414067
WBInteraction000416569
WBInteraction000424954
WBInteraction000426566
WBInteraction000432557
WBInteraction000432633
WBInteraction000441520
WBInteraction000441667
WBInteraction000442160
WBInteraction000451247
WBInteraction000521082
WBInteraction000548194
WBInteraction000551655
WBInteraction000554188
WBInteraction000567672
WBInteraction000578778
Map_infoMapIVPosition2.45941Error0.001904
PositivePositive_cloneH04M03Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (13)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene