WormBase Tree Display for Gene: WBGene00016058

WBGene00016058 SMap: S_parent: Sequence: C24D10
  Identity: Version: 2
    Name: CGC_name: nspd-3 Person_evidence: WBPerson1983
      Sequence_name: C24D10.7
      Molecular_name: C24D10.7
        C24D10.7.1
        CE16879
      Other_name: CELE_C24D10.7 Accession_evidence: NDB BX284604
      Public_name: nspd-3
    DB_info: Database: AceView gene 4F928
        WormQTL gene WBGene00016058
        WormFlux gene WBGene00016058
        NDB locus_tag CELE_C24D10.7
        Panther gene CAEEL|WormBase=WBGene00016058|UniProtKB=G5EG23
          family PTHR35375
        NCBI gene 259569
        RefSeq protein NM_068329.5
        TREEFAM TREEFAM_ID TF319437
        TrEMBL UniProtAcc G5EG23
        UniProt_GCRP UniProtAcc G5EG23
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 03 Oct 2006 09:54:23 WBPerson2970 Name_change: CGC_name: nspd-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspd
    Allele: WBVar01499754
      WBVar01499395
      WBVar01499396
      WBVar01894107
      WBVar01894108
      WBVar01499242
      WBVar01499633
      WBVar01500245
    RNASeq_FPKM (74)
    Ortholog (85)
    Paralog: WBGene00010633 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012781 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00017808 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00017386 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022754 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021280 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020860 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020715 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00043147 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including amphid sheath cell; intestine; muscle cell; neurons; and sperm based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray and RNA-seq studies. Is affected by twenty-seven chemicals including Ethanol; methylmercury hydroxide; and methylmercuric chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF780, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF780). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C24D10.7
    Corresponding_transcript: C24D10.7.1
    Other_sequence: CRC01200_1
      CR01622
    Associated_feature: WBsf230063
  Experimental_info: RNAi_result: WBRNAi00041089 Inferred_automatically: RNAi_primary
      WBRNAi00011109 Inferred_automatically: RNAi_primary
      WBRNAi00011108 Inferred_automatically: RNAi_primary
      WBRNAi00041090 Inferred_automatically: RNAi_primary
      WBRNAi00022616 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017312
      Expr1145125
      Expr2014480
      Expr2032719
    Drives_construct: WBCnstr00028355
    Construct_product: WBCnstr00028355
    Microarray_results (22)
    Expression_cluster (215)
    Interaction (211)
  Map_info: Map: IV Position: 1.53533
    Positive: Positive_clone: C24D10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene