WormBase Tree Display for Gene: WBGene00020715

WBGene00020715 SMap: S_parent: Sequence: T23B7
  Identity: Version: 2
    Name: CGC_name: nspd-4 Person_evidence: WBPerson1983
      Sequence_name: T23B7.1
      Molecular_name: T23B7.1
        T23B7.1.1
        CE02882
      Other_name: CELE_T23B7.1 Accession_evidence: NDB BX284602
      Public_name: nspd-4
    DB_info: Database: AceView gene 2F133
        WormQTL gene WBGene00020715
        WormFlux gene WBGene00020715
        NDB locus_tag CELE_T23B7.1
        NCBI gene 173835
        RefSeq protein NM_062470.5
        TREEFAM TREEFAM_ID TF319437
        TrEMBL UniProtAcc G5EES8
        UniProt_GCRP UniProtAcc G5EES8
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 03 Oct 2006 09:54:23 WBPerson2970 Name_change: CGC_name: nspd-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspd
    Allele: WBVar01499702
      WBVar02151795
      WBVar01498435
      WBVar00728426
      WBVar00728427
      WBVar00728428
      WBVar01783225
      WBVar01719670
      WBVar01719671
      WBVar02150103
    RNASeq_FPKM (74)
    Ortholog (85)
    Paralog: WBGene00010633 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00012781 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00017386 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00017808 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00043147 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00020860 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00021280 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00022754 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00016058 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in arcade cell; intestine; pharyngeal-intestinal valve cell; sperm; and in male based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; age-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twenty-nine chemicals including Ethanol; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF780, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF780). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T23B7.1
    Corresponding_transcript: T23B7.1.1
    Other_sequence: PP02339
    Associated_feature: WBsf987719
      WBsf1012141
      WBsf221186
  Experimental_info: RNAi_result: WBRNAi00019060 Inferred_automatically: RNAi_primary
      WBRNAi00053901 Inferred_automatically: RNAi_primary
      WBRNAi00044415 Inferred_automatically: RNAi_primary
      WBRNAi00035848 Inferred_automatically: RNAi_primary
      WBRNAi00013149 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1157446
      Expr2014481
      Expr2032720
    Drives_construct: WBCnstr00024938
    Construct_product: WBCnstr00024938
    Microarray_results (17)
    Expression_cluster (205)
    Interaction (229)
  Map_info: Map: II Position: -2.99254
    Positive: Positive_clone: T23B7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene