WormBase Tree Display for Gene: WBGene00016058
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WBGene00016058 | SMap | S_parent | Sequence | C24D10 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nspd-3 | Person_evidence | WBPerson1983 | |||
Sequence_name | C24D10.7 | ||||||
Molecular_name | C24D10.7 | ||||||
C24D10.7.1 | |||||||
CE16879 | |||||||
Other_name | CELE_C24D10.7 | Accession_evidence | NDB | BX284604 | |||
Public_name | nspd-3 | ||||||
DB_info | Database | AceView | gene | 4F928 | |||
WormQTL | gene | WBGene00016058 | |||||
WormFlux | gene | WBGene00016058 | |||||
NDB | locus_tag | CELE_C24D10.7 | |||||
Panther | gene | CAEEL|WormBase=WBGene00016058|UniProtKB=G5EG23 | |||||
family | PTHR35375 | ||||||
NCBI | gene | 259569 | |||||
RefSeq | protein | NM_068329.5 | |||||
TREEFAM | TREEFAM_ID | TF319437 | |||||
TrEMBL | UniProtAcc | G5EG23 | |||||
UniProt_GCRP | UniProtAcc | G5EG23 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nspd | ||||||
Allele | WBVar01499754 | ||||||
WBVar01499395 | |||||||
WBVar01499396 | |||||||
WBVar01894107 | |||||||
WBVar01894108 | |||||||
WBVar01499242 | |||||||
WBVar01499633 | |||||||
WBVar01500245 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (85) | |||||||
Paralog | WBGene00010633 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00012781 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00017808 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00017386 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00022754 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00021280 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00020860 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00020715 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00043147 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Enriched in several structures, including amphid sheath cell; intestine; muscle cell; neurons; and sperm based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray and RNA-seq studies. Is affected by twenty-seven chemicals including Ethanol; methylmercury hydroxide; and methylmercuric chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF780, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF780). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C24D10.7 | |||||
Corresponding_transcript | C24D10.7.1 | ||||||
Other_sequence | CRC01200_1 | ||||||
CR01622 | |||||||
Associated_feature | WBsf230063 | ||||||
Experimental_info | RNAi_result | WBRNAi00041089 | Inferred_automatically | RNAi_primary | |||
WBRNAi00011109 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011108 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041090 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022616 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1017312 | ||||||
Expr1145125 | |||||||
Expr2014480 | |||||||
Expr2032719 | |||||||
Drives_construct | WBCnstr00028355 | ||||||
Construct_product | WBCnstr00028355 | ||||||
Microarray_results (22) | |||||||
Expression_cluster (215) | |||||||
Interaction (211) | |||||||
Map_info | Map | IV | Position | 1.53533 | |||
Positive | Positive_clone | C24D10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |