WormBase Tree Display for Gene: WBGene00013052
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| WBGene00013052 | SMap | S_parent | Sequence | Y50E8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | scrm-7 | Paper_evidence | WBPaper00029228 | |||||
| Person_evidence | WBPerson1606 | ||||||||
| Sequence_name | Y50E8A.9 | ||||||||
| Molecular_name | Y50E8A.9a | ||||||||
| Y50E8A.9a.1 | |||||||||
| CE22316 | |||||||||
| Y50E8A.9b | |||||||||
| CE48167 | |||||||||
| Y50E8A.9c | |||||||||
| CE48148 | |||||||||
| Y50E8A.9b.1 | |||||||||
| Y50E8A.9c.1 | |||||||||
| Other_name | CELE_Y50E8A.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | scrm-7 | ||||||||
| DB_info | Database | AceView | gene | 5P258 | |||||
| WormQTL | gene | WBGene00013052 | |||||||
| WormFlux | gene | WBGene00013052 | |||||||
| NDB | locus_tag | CELE_Y50E8A.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013052|UniProtKB=Q9NAE9 | |||||||
| family | PTHR23248 | ||||||||
| NCBI | gene | 190110 | |||||||
| RefSeq | protein | NM_001276963.1 | |||||||
| NM_074245.3 | |||||||||
| NM_001276962.2 | |||||||||
| TrEMBL | UniProtAcc | Q9NAE9 | |||||||
| L8E6J6 | |||||||||
| L8E6X3 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9NAE9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 May 2007 10:33:07 | WBPerson2970 | Name_change | CGC_name | scrm-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | scrm | ||||||||
| Allele (28) | |||||||||
| Strain | WBStrain00032764 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024209 | ||||||||
| 00024210 | |||||||||
| 00024211 | |||||||||
| 00120019 | |||||||||
| 00120020 | |||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00008681 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00009753 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011935 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00014200 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015437 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019530 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019531 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00235369 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | scrm-7 encodes a putative phospholipid scramblase homologous to humanPLSCR1-5, and paralogous to other C. elegans SCRMs (e.g., SCRM-1);scrm-7(RNAi) animals have no obvious phenotype. | Paper_evidence | WBPaper00004911 | |||||
| WBPaper00012809 | |||||||||
| WBPaper00013208 | |||||||||
| WBPaper00013590 | |||||||||
| WBPaper00029228 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 16 May 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable phospholipid scramblase activity. Predicted to be involved in plasma membrane phospholipid scrambling. Predicted to be located in plasma membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y50E8A.9a | |||||||
| Y50E8A.9b | |||||||||
| Y50E8A.9c | |||||||||
| Corresponding_transcript | Y50E8A.9a.1 | ||||||||
| Y50E8A.9b.1 | |||||||||
| Y50E8A.9c.1 | |||||||||
| Other_sequence | CR10190 | ||||||||
| CV508170.1 | |||||||||
| FG647847.1 | |||||||||
| XIC00772_1 | |||||||||
| Associated_feature | WBsf979052 | ||||||||
| WBsf234985 | |||||||||
| WBsf234986 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00097545 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037334 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020846 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057109 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018846 | ||||||||
| Expr1160555 | |||||||||
| Expr2015655 | |||||||||
| Expr2033887 | |||||||||
| Drives_construct | WBCnstr00029766 | ||||||||
| Construct_product | WBCnstr00029766 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction (55) | |||||||||
| Map_info | Map | V | Position | 6.84508 | Error | 0.013854 | |||
| Positive | Positive_clone | Y50E8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029228 | ||||||||
| WBPaper00030738 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063045 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
