WormBase Tree Display for Gene: WBGene00013052
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WBGene00013052 | SMap | S_parent | Sequence | Y50E8A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 5P258 | |||||
WormQTL | gene | WBGene00013052 | |||||||
WormFlux | gene | WBGene00013052 | |||||||
NDB | locus_tag | CELE_Y50E8A.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013052|UniProtKB=Q9NAE9 | |||||||
family | PTHR23248 | ||||||||
NCBI | gene | 190110 | |||||||
RefSeq | protein | NM_001276963.1 | |||||||
NM_074245.3 | |||||||||
NM_001276962.2 | |||||||||
TrEMBL | UniProtAcc | Q9NAE9 | |||||||
L8E6J6 | |||||||||
L8E6X3 | |||||||||
UniProt_GCRP | UniProtAcc | Q9NAE9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 03 May 2007 10:33:07 | WBPerson2970 | Name_change | CGC_name | scrm-7 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | scrm | ||||||||
Allele (28) | |||||||||
Strain | WBStrain00032764 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00024209 | ||||||||
00024210 | |||||||||
00024211 | |||||||||
00120019 | |||||||||
00120020 | |||||||||
Ortholog (24) | |||||||||
Paralog | WBGene00008681 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00009753 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00011935 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00014200 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015437 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019530 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019531 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00235369 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Concise_description | scrm-7 encodes a putative phospholipid scramblase homologous to humanPLSCR1-5, and paralogous to other C. elegans SCRMs (e.g., SCRM-1);scrm-7(RNAi) animals have no obvious phenotype. | Paper_evidence | WBPaper00004911 | |||||
WBPaper00012809 | |||||||||
WBPaper00013208 | |||||||||
WBPaper00013590 | |||||||||
WBPaper00029228 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 16 May 2007 00:00:00 | ||||||||
Automated_description | Predicted to enable phospholipid scramblase activity. Predicted to be involved in plasma membrane phospholipid scrambling. Predicted to be located in plasma membrane. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y50E8A.9a | |||||||
Y50E8A.9b | |||||||||
Y50E8A.9c | |||||||||
Corresponding_transcript | Y50E8A.9a.1 | ||||||||
Y50E8A.9b.1 | |||||||||
Y50E8A.9c.1 | |||||||||
Other_sequence | CR10190 | ||||||||
CV508170.1 | |||||||||
FG647847.1 | |||||||||
XIC00772_1 | |||||||||
Associated_feature | WBsf979052 | ||||||||
WBsf234985 | |||||||||
WBsf234986 | |||||||||
Experimental_info | RNAi_result | WBRNAi00097545 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037334 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020846 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00057109 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018846 | ||||||||
Expr1160555 | |||||||||
Expr2015655 | |||||||||
Expr2033887 | |||||||||
Drives_construct | WBCnstr00029766 | ||||||||
Construct_product | WBCnstr00029766 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (126) | |||||||||
Interaction (55) | |||||||||
Map_info | Map | V | Position | 6.84508 | Error | 0.013854 | |||
Positive | Positive_clone | Y50E8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00029228 | ||||||||
WBPaper00030738 | |||||||||
WBPaper00042257 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00063045 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |