WormBase Tree Display for Sequence: Y50E8A
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| Y50E8A | DNA | Y50E8A | 61864 | ||
|---|---|---|---|---|---|
| SMap | S_child (12) | ||||
| Structure | From | Source | CHROMOSOME_V | ||
| Overlap_right | C48G7 | 61761 | |||
| Overlap_left | R08A2 | ||||
| Clone_left_end | C48G7 | 61761 | |||
| Y50E8A | 1 | ||||
| Clone_right_end | R08A2 | 106 | |||
| Y50E8A | 61864 | ||||
| DB_info | Database | EMBL | NDB_AC | AL117200 | |
| NDB_SV | AL117200.3 | ||||
| DB_remark | [991122 dl1] : Frameshift detected in sequence. Single nucleotide removed from the project. | ||||
| [121025] Sequence correction: SNP 0 bases @ 8485 | |||||
| Keyword | HTG | ||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | |||
| Origin | From_author | Steward CA | |||
| From_laboratory | HX | ||||
| Date_directory | 991027 | ||||
| Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00000001 | ||||
| Visible | Clone | Y50E8A | |||
| Remark | Transposon Y50E8A.17 converted into an S_Child [020208 kj] | ||||
| Properties | Genomic_canonical | ||||
| Checksum | MD5 | 0934b68b318a382f52e051db011dbaef | |||
| Status | Finished | 19 Jul 1999 00:00:00 | |||
| Submitted | 06 Sep 1999 00:00:00 | ||||
| Annotated | 22 Nov 1999 00:00:00 | ||||
| Map | Sequence-V | Ends | Left | 8361 | |
| Right | 8398 | ||||
| Interpolated_map_position | V | 6.79492 | |||
| Assembly_tags | oligo | 4253 | 4236 | serial#=Y50E8.3 template=pa31g5 sequence=TTTATTTCGTTGCGTCTC flags= | |
| 5635 | 5619 | serial#=Y50E8.4 template=pa30h12 sequence=GCGAGGTGGTTTACTTG flags= | |||
| 20573 | 20556 | serial#=Y50E8.2 template=Y50E8a1 sequence=TACCAGTTTTATGACCAG flags= | |||
| 28436 | 28419 | serial#=Y50E8.5 template=pa28d3 sequence=GAAGTTTGAGAAGACGAC flags= | |||
| 29886 | 29904 | serial#=Y50E8.8 template= sequence= CTCTCTGTGGCTTCCCAAA flags= | |||
| 30624 | 30607 | serial#=Y50E8.9 template= sequence=GTAAAATATGGTGGGAAG flags= | |||
| 32831 | 32814 | serial#=Y50E8.1 template=Pa28f4 sequence=GCTTTGTCCGTATTTCTC flags= | |||
| 37644 | 37628 | serial#=Y50E8.6 template=qb86d6 sequence=GAGGTAAGGGGATTTTC flags= | |||
| 41399 | 41416 | serial#=Y50E8.7 template=pa46h11 sequence=AACCACTGTTGTTTTCTC flags= | |||
| Clone left end | 61761 | 61764 | C48G7 | ||
| Finished Left | 1 | 6 | Y50E8A | ||
| Clone right end | 101 | 106 | R08A2 | ||
| annotation | 275 | 304 | First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [ ] Single clone region [ ] Forced join [x] Other Add a comment here - Single direction primer reads only. | ||
| 16613 | 20170 | First select a Feature - [ ] Unsure [X] Misc_feature Then select the text for the note(s) - [X] Tandem repeat [ ] Single clone region [ ] Forced join [ ] Other Add a comment here - Contains single clone regions. | |||
| 29909 | 32533 | First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [x] Tandem repeat [ ] Single clone region [ ] Forced join [ ] Other Add a comment here - Contains single clone regions | |||
| 37362 | 37429 | First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [x] Single clone region [ ] Forced join [ ] Other Add a comment here - | |||
| 37452 | 37521 | First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [x] Single clone region [ ] Forced join [ ] Other Add a comment here - | |||
| 43269 | 44756 | First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [x] Tandem repeat [ ] Single clone region [ ] Forced join [ ] Other Add a comment here - | |||
| Finished Right | 61861 | 61864 | Y50E8A | ||
| Method | Genomic_canonical |
