WormBase Tree Display for Gene: WBGene00013052
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WBGene00013052 | SMap | S_parent | Sequence | Y50E8A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | scrm-7 | Paper_evidence | WBPaper00029228 | |||
Person_evidence | WBPerson1606 | ||||||
Sequence_name | Y50E8A.9 | ||||||
Molecular_name | Y50E8A.9a | ||||||
Y50E8A.9a.1 | |||||||
CE22316 | |||||||
Y50E8A.9b | |||||||
CE48167 | |||||||
Y50E8A.9c | |||||||
CE48148 | |||||||
Y50E8A.9b.1 | |||||||
Y50E8A.9c.1 | |||||||
Other_name | CELE_Y50E8A.9 | Accession_evidence | NDB | BX284605 | |||
Public_name | scrm-7 | ||||||
DB_info | Database | AceView | gene | 5P258 | |||
WormQTL | gene | WBGene00013052 | |||||
WormFlux | gene | WBGene00013052 | |||||
NDB | locus_tag | CELE_Y50E8A.9 | |||||
Panther | gene | CAEEL|WormBase=WBGene00013052|UniProtKB=Q9NAE9 | |||||
family | PTHR23248 | ||||||
NCBI | gene | 190110 | |||||
RefSeq | protein | NM_001276963.1 | |||||
NM_074245.3 | |||||||
NM_001276962.2 | |||||||
TrEMBL | UniProtAcc | Q9NAE9 | |||||
L8E6J6 | |||||||
L8E6X3 | |||||||
UniProt_GCRP | UniProtAcc | Q9NAE9 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | scrm | ||||||
Allele (28) | |||||||
Strain | WBStrain00032764 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00024209 | ||||||
00024210 | |||||||
00024211 | |||||||
00120019 | |||||||
00120020 | |||||||
Ortholog (24) | |||||||
Paralog | WBGene00008681 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00009753 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00011935 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00014200 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00015437 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00019530 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00019531 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00235369 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Concise_description | scrm-7 encodes a putative phospholipid scramblase homologous to humanPLSCR1-5, and paralogous to other C. elegans SCRMs (e.g., SCRM-1);scrm-7(RNAi) animals have no obvious phenotype. | Paper_evidence | WBPaper00004911 | |||
WBPaper00012809 | |||||||
WBPaper00013208 | |||||||
WBPaper00013590 | |||||||
WBPaper00029228 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 16 May 2007 00:00:00 | ||||||
Automated_description | Predicted to enable phospholipid scramblase activity. Predicted to be involved in plasma membrane phospholipid scrambling. Predicted to be located in plasma membrane. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y50E8A.9a | |||||
Y50E8A.9b | |||||||
Y50E8A.9c | |||||||
Corresponding_transcript | Y50E8A.9a.1 | ||||||
Y50E8A.9b.1 | |||||||
Y50E8A.9c.1 | |||||||
Other_sequence | CR10190 | ||||||
CV508170.1 | |||||||
FG647847.1 | |||||||
XIC00772_1 | |||||||
Associated_feature | WBsf979052 | ||||||
WBsf234985 | |||||||
WBsf234986 | |||||||
Experimental_info | RNAi_result | WBRNAi00097545 | Inferred_automatically | RNAi_primary | |||
WBRNAi00037334 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020846 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057109 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1018846 | ||||||
Expr1160555 | |||||||
Expr2015655 | |||||||
Expr2033887 | |||||||
Drives_construct | WBCnstr00029766 | ||||||
Construct_product | WBCnstr00029766 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (126) | |||||||
Interaction (55) | |||||||
Map_info | Map | V | Position | 6.84508 | Error | 0.013854 | |
Positive | Positive_clone | Y50E8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00029228 | ||||||
WBPaper00030738 | |||||||
WBPaper00042257 | |||||||
WBPaper00055090 | |||||||
WBPaper00063045 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |