WormBase Tree Display for Gene: WBGene00004924
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WBGene00004924 | Evidence | Person_evidence | WBPerson298 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T23H2 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | snt-4 | Person_evidence | WBPerson508 | |||||
Sequence_name | T23H2.2 | ||||||||
Molecular_name | T23H2.2 | ||||||||
T23H2.2.1 | |||||||||
CE30456 | |||||||||
Other_name | CELE_T23H2.2 | Accession_evidence | NDB | BX284601 | |||||
Public_name | snt-4 | ||||||||
DB_info | Database | AceView | gene | 1H17 | |||||
WormQTL | gene | WBGene00004924 | |||||||
WormFlux | gene | WBGene00004924 | |||||||
NDB | locus_tag | CELE_T23H2.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004924|UniProtKB=P91493 | |||||||
family | PTHR10024 | ||||||||
NCBI | gene | 172346 | |||||||
RefSeq | protein | NM_059452.9 | |||||||
TrEMBL | UniProtAcc | P91493 | |||||||
UniProt_GCRP | UniProtAcc | P91493 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | snt | ||||||||
Allele (63) | |||||||||
Strain | WBStrain00031457 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (16) | |||||||||
Ortholog (41) | |||||||||
Paralog | WBGene00004921 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00004922 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00004923 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00011682 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00004926 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00004925 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00004316 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00006306 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00020861 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable several functions, including SNARE binding activity; calcium ion binding activity; and phospholipid binding activity. Predicted to be involved in cellular response to calcium ion; regulation of secretion by cell; and vesicle-mediated transport. Predicted to be located in several cellular components, including axon; exocytic vesicle; and synapse. Expressed in intestine. Is an ortholog of human SYT4 (synaptotagmin 4). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T23H2.2 | |||||||
Corresponding_transcript | T23H2.2.1 | ||||||||
Other_sequence (34) | |||||||||
Associated_feature | WBsf643368 | ||||||||
WBsf656408 | |||||||||
WBsf656409 | |||||||||
WBsf983938 | |||||||||
WBsf983939 | |||||||||
WBsf1009957 | |||||||||
WBsf217823 | |||||||||
Experimental_info (7) | |||||||||
Map_info | Map | I | Position | 1.09503 | Error | 0.003632 | |||
Positive | Positive_clone | T23H2 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4681 | |||||||
5563 | |||||||||
Pseudo_map_position | |||||||||
Reference (3) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |