WormBase Tree Display for Gene: WBGene00004316

WBGene00004316 SMap: S_parent: Sequence: F37A4
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: rbf
    Allele (346)
    Strain: WBStrain00029052
      WBStrain00037267
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (51)
    Paralog: WBGene00004921 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004922 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004923 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004924 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004925 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004926 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006306 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00011682 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00020861 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: rbf-1 encodes the sole C. elegans rabphilin homolog; rbf-1 activity is required for normal basal rates of locomotion (in the absence of stimulation) and, in combination with SNARE components ric-4, snb-1, and unc-64, for normal rates of both basal and stimulated locomotion; RBF-1 is expressed in the nerve ring and in the dorsal and ventral nerve cords and colocalizes with synaptic vesicle markers. Paper_evidence: WBPaper00004976
          Curator_confirmed: WBPerson1843
          Date_last_updated: 22 Jun 2007 00:00:00
      Automated_description: Predicted to enable metal ion binding activity. Involved in dense core granule exocytosis and positive regulation of locomotion. Located in synaptic vesicle. Expressed in dorsal nerve cord; nerve ring; neurons; and ventral nerve cord. Is an ortholog of human RPH3A (rabphilin 3A). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F37A4.7a
      F37A4.7b
      F37A4.7c
      F37A4.7d
    Corresponding_CDS_history: F37A4.7d:wp275
    Corresponding_transcript: F37A4.7a.1
      F37A4.7a.2
      F37A4.7a.3
      F37A4.7b.1
      F37A4.7c.1
      F37A4.7d.1
    Other_sequence (48)
    Associated_feature (35)
  Experimental_info: RNAi_result (14)
    Expr_pattern: Expr1718
      Expr1719
      Expr3633
      Expr1024340
      Expr1032141
      Expr1150454
      Expr2015267
      Expr2033501
    Drives_construct: WBCnstr00000698
      WBCnstr00010412
    Construct_product: WBCnstr00000698
      WBCnstr00007721
      WBCnstr00010412
      WBCnstr00011558
    Antibody: WBAntibody00000428
    Microarray_results (43)
    Expression_cluster (171)
    Interaction (27)
  Map_info: Map: III Position: -1.01086 Error: 0.003652
    Positive: Positive_clone: F37A4 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4626
        4987
        5453
    Pseudo_map_position
  Reference (16)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene