WormBase Tree Display for Gene: WBGene00003736
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| WBGene00003736 | SMap | S_parent | Sequence | ZK822 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhx-9 | |||||||
| Sequence_name | ZK822.3 | ||||||||
| Molecular_name | ZK822.3a | ||||||||
| ZK822.3a.1 | |||||||||
| CE27559 | |||||||||
| ZK822.3b | |||||||||
| CE27560 | |||||||||
| ZK822.3c | |||||||||
| CE28196 | |||||||||
| ZK822.3b.1 | |||||||||
| ZK822.3c.1 | |||||||||
| Other_name | CELE_ZK822.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | nhx-9 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhx | ||||||||
| Allele (63) | |||||||||
| Strain | WBStrain00031663 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (23) | |||||||||
| Ortholog (49) | |||||||||
| Paralog | WBGene00003729 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003730 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003731 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003732 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003733 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003734 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003735 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003943 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable potassium:proton antiporter activity and sodium:proton antiporter activity. Predicted to be involved in potassium ion transmembrane transport; regulation of intracellular pH; and sodium ion import across plasma membrane. Predicted to be located in plasma membrane. Expressed in excretory cell; intestine; and phasmid sensillum. Human ortholog(s) of this gene implicated in congenital secretory sodium diarrhea 8 and end stage renal disease. Is an ortholog of human SLC9A3 (solute carrier family 9 member A3) and SLC9A5 (solute carrier family 9 member A5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:783 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11078) | ||||
| DOID:0060777 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11073) | ||||||
| Molecular_info | Corresponding_CDS | ZK822.3a | |||||||
| ZK822.3b | |||||||||
| ZK822.3c | |||||||||
| Corresponding_CDS_history | ZK822.3:wp49 | ||||||||
| ZK822.3c:wp61 | |||||||||
| ZK822.3c:wp229 | |||||||||
| Corresponding_transcript | ZK822.3a.1 | ||||||||
| ZK822.3b.1 | |||||||||
| ZK822.3c.1 | |||||||||
| Other_sequence (25) | |||||||||
| Associated_feature | WBsf216765 | ||||||||
| WBsf646433 | |||||||||
| WBsf646434 | |||||||||
| WBsf646435 | |||||||||
| WBsf660771 | |||||||||
| WBsf997992 | |||||||||
| WBsf229221 | |||||||||
| WBsf229222 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00086174 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00059743 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00086173 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059742 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2238 | ||||||||
| Expr2248 | |||||||||
| Expr1014311 | |||||||||
| Expr1031747 | |||||||||
| Expr1163167 | |||||||||
| Expr2014260 | |||||||||
| Expr2032500 | |||||||||
| Drives_construct | WBCnstr00010717 | ||||||||
| WBCnstr00010728 | |||||||||
| WBCnstr00035906 | |||||||||
| Construct_product | WBCnstr00010728 | ||||||||
| WBCnstr00035906 | |||||||||
| Microarray_results (35) | |||||||||
| Expression_cluster (165) | |||||||||
| Interaction (29) | |||||||||
| Map_info | Map | IV | Position | 5.41637 | Error | 0.003754 | |||
| Positive | Positive_clone | ZK822 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4302 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00018859 | ||||||||
| WBPaper00035475 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00047401 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064064 | |||||||||
| Remark | Sequence connection from [Nehrke K, Melvin J] | ||||||||
| nxh-2 nxh-3 nxh-4 nxh-5 nxh-6 nxh-7 nxh-8 nxh-9 published in cgc5421 actually refer to nhx genes | CGC_data_submission | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
