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WormBase Tree Display for Gene: WBGene00003099

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Name Class

WBGene00003099SMapS_parentSequenceF17E9
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classlys
Allele (13)
RNASeq_FPKM (74)
GO_annotation00036031
00036032
00036033
OrthologWBGene00028442Caenorhabditis briggsaePerson_evidenceWBPerson168
WBPerson2531
WBGene00062611Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WBGene00121985Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00123483Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00129637Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00118328Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00098490Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00206956Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00111009Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00111008Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00093955Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00148539Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158000Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00222536Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g5950Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP28.g566Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g567Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g619Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g620Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g12620Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g12622Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g25708Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9899Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7353Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g11382Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g12159Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g14351Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g26807Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cang_2012_03_13_00618.g12830Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00831.g14444Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00831.g14451Caenorhabditis angariaFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07463Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11909Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14526Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g14527Panagrellus redivivusFrom_analysisWormBase-Compara
chrIV_pilon.g11043Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00247043Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00111006Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280731Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280781Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00263881Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00003090Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003091Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003092Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003093Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00003094Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00003095Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00003096Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003097Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003098Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in innate immune response and signal transduction.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF17E9.11
Corresponding_transcriptF17E9.11.1
Other_sequenceCB036679.1
FE916548.1
ASC02477_1
JI172822.1
PSC01951_1
GW408552.1
GW410064.1
PSC01195_2
AS05503
Experimental_infoRNAi_resultWBRNAi00095222Inferred_automaticallyRNAi_primary
WBRNAi00075926Inferred_automaticallyRNAi_primary
WBRNAi00013470Inferred_automaticallyRNAi_primary
WBRNAi00044892Inferred_automaticallyRNAi_primary
WBRNAi00031077Inferred_automaticallyRNAi_primary
Expr_patternExpr1024255
Expr1148860
Expr2013311
Expr2031542
Drives_constructWBCnstr00036230
Construct_productWBCnstr00036230
Microarray_results (16)
Expression_cluster (221)
InteractionWBInteraction000121120
WBInteraction000137235
WBInteraction000306805
WBInteraction000382767
WBInteraction000426128
WBInteraction000428043
WBInteraction000505016
Map_infoMapIVPosition3.70831Error0.000535
PositivePositive_cloneF17E9Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00005382
WBPaper00006437
WBPaper00024209
WBPaper00028789
WBPaper00031800
WBPaper00031802
WBPaper00039111
WBPaper00059378
WBPaper00059715
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene