WormBase Tree Display for Gene: WBGene00003096
expand all nodes | collapse all nodes | view schema
WBGene00003096 | SMap | S_parent | Sequence | C02A12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | lys-7 | Person_evidence | WBPerson168 | |||||
Sequence_name | C02A12.4 | ||||||||
Molecular_name | C02A12.4 | ||||||||
C02A12.4.1 | |||||||||
CE07828 | |||||||||
Other_name | CELE_C02A12.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | lys-7 | ||||||||
DB_info | Database | AceView | gene | 5D960 | |||||
WormQTL | gene | WBGene00003096 | |||||||
WormFlux | gene | WBGene00003096 | |||||||
NDB | locus_tag | CELE_C02A12.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003096|UniProtKB=O16202 | |||||||
family | PTHR23208 | ||||||||
NCBI | gene | 178772 | |||||||
RefSeq | protein | NM_071571.9 | |||||||
SwissProt | UniProtAcc | O16202 | |||||||
TREEFAM | TREEFAM_ID | TF316378 | |||||||
UniProt_GCRP | UniProtAcc | O16202 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lys | ||||||||
Allele (30) | |||||||||
Strain | WBStrain00031984 | ||||||||
WBStrain00031985 | |||||||||
WBStrain00004711 | |||||||||
WBStrain00004740 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (14) | |||||||||
Ortholog (20) | |||||||||
Paralog | WBGene00003090 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003091 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003092 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00003093 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00003094 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00003095 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00003097 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003098 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00003099 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description (2) | |||||||||
Molecular_info | Corresponding_CDS | C02A12.4 | |||||||
Corresponding_transcript | C02A12.4.1 | ||||||||
Other_sequence (84) | |||||||||
Associated_feature | WBsf019148 | ||||||||
WBsf019149 | |||||||||
WBsf652532 | |||||||||
WBsf233493 | |||||||||
WBsf233494 | |||||||||
Experimental_info | RNAi_result | WBRNAi00063151 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095376 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089364 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00094551 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089345 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00063153 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00095394 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00090656 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00095407 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00078254 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00009960 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00063152 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00095379 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00094540 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00039381 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00115928 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00095420 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00092443 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00094566 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00075901 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00001936 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1973 | ||||||||
Expr4716 | |||||||||
Expr10716 | |||||||||
Expr1018008 | |||||||||
Expr1143497 | |||||||||
Expr2013318 | |||||||||
Expr2031549 | |||||||||
Drives_construct | WBCnstr00009965 | ||||||||
WBCnstr00012193 | |||||||||
WBCnstr00015892 | |||||||||
WBCnstr00017492 | |||||||||
WBCnstr00036232 | |||||||||
WBCnstr00041439 | |||||||||
Construct_product | WBCnstr00009965 | ||||||||
WBCnstr00012193 | |||||||||
WBCnstr00036232 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (437) | |||||||||
Interaction (200) | |||||||||
WBProcess | WBbiopr:00000008 | ||||||||
WBbiopr:00000039 | |||||||||
Map_info | Map | V | Position | -10.8998 | Error | 0.024633 | |||
Positive | Positive_clone | C02A12 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4881 | |||||||
4924 | |||||||||
5423 | |||||||||
Pos_neg_data | 10776 | ||||||||
Pseudo_map_position | |||||||||
Reference (65) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |