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WormBase Tree Display for Gene: WBGene00003091

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Name Class

WBGene00003091SMapS_parentSequenceY22F5A
IdentityVersion1
NameCGC_namelys-2Person_evidenceWBPerson168
Sequence_nameY22F5A.5
Molecular_nameY22F5A.5
Y22F5A.5.1
CE16606
Other_nameCELE_Y22F5A.5Accession_evidenceNDBBX284605
Public_namelys-2
DB_infoDatabaseAceViewgene5K760
WormQTLgeneWBGene00003091
WormFluxgeneWBGene00003091
NDBlocus_tagCELE_Y22F5A.5
PanthergeneCAEEL|WormBase=WBGene00003091|UniProtKB=O62416
familyPTHR23208
NCBIgene179429
RefSeqproteinNM_073242.7
SwissProtUniProtAccO62416
TREEFAMTREEFAM_IDTF316378
UniProt_GCRPUniProtAccO62416
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:30WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlys
Allele (19)
RNASeq_FPKM (74)
GO_annotation (11)
Ortholog (31)
ParalogWBGene00003090Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00003096Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00003093Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003099Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003092Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003094Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003095Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003098Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003097Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
Structured_description (2)
Molecular_infoCorresponding_CDSY22F5A.5
Corresponding_transcriptY22F5A.5.1
Other_sequence (135)
Associated_featureWBsf034362
WBsf652976
WBsf652977
WBsf652978
WBsf234363
Experimental_infoRNAi_resultWBRNAi00094558Inferred_automaticallyRNAi_primary
WBRNAi00075995Inferred_automaticallyRNAi_primary
WBRNAi00036714Inferred_automaticallyRNAi_primary
WBRNAi00095408Inferred_automaticallyRNAi_primary
WBRNAi00055692Inferred_automaticallyRNAi_primary
WBRNAi00110089Inferred_automaticallyRNAi_primary
WBRNAi00020123Inferred_automaticallyRNAi_primary
WBRNAi00095419Inferred_automaticallyRNAi_primary
Expr_patternExpr1013427
Expr1159218
Expr2013313
Expr2031544
Drives_constructWBCnstr00009963
WBCnstr00036237
Construct_productWBCnstr00009963
WBCnstr00036237
Microarray_results (18)
Expression_cluster (389)
Interaction (99)
WBProcessWBbiopr:00000039
WBbiopr:00000092
Map_infoMapVPosition2.45157Error0.000856
PositivePositive_cloneY22F5AInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00005382
WBPaper00006437
WBPaper00006465
WBPaper00024209
WBPaper00027295
WBPaper00028482
WBPaper00028789
WBPaper00031802
WBPaper00032022
WBPaper00032196
WBPaper00032370
WBPaper00036640
WBPaper00036653
WBPaper00040209
WBPaper00041533
WBPaper00041800
WBPaper00053423
WBPaper00059839
WBPaper00061178
WBPaper00061383
WBPaper00062456
WBPaper00065034
WBPaper00065331
WBPaper00065625
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene