WormBase Tree Display for Gene: WBGene00000174
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| WBGene00000174 | Evidence | Person_evidence | WBPerson548 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C32C4 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | aqp-6 | Person_evidence | WBPerson300 | |||||
| Sequence_name | C32C4.2 | ||||||||
| Molecular_name | C32C4.2a | ||||||||
| C32C4.2a.1 | |||||||||
| CE05345 | |||||||||
| C32C4.2b | |||||||||
| CE44791 | |||||||||
| C32C4.2c | |||||||||
| CE47018 | |||||||||
| C32C4.2b.1 | |||||||||
| C32C4.2c.1 | |||||||||
| Other_name | CELE_C32C4.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | aqp-6 | ||||||||
| DB_info | Database | AceView | gene | 5L131 | |||||
| WormQTL | gene | WBGene00000174 | |||||||
| WormFlux | gene | WBGene00000174 | |||||||
| NDB | locus_tag | CELE_C32C4.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000174|UniProtKB=H2FLH4 | |||||||
| family | PTHR45687 | ||||||||
| NCBI | gene | 183121 | |||||||
| RefSeq | protein | NM_001269317.4 | |||||||
| NM_001269319.3 | |||||||||
| NM_001269316.4 | |||||||||
| TrEMBL | UniProtAcc | H2FLH4 | |||||||
| Q18352 | |||||||||
| D5MCS1 | |||||||||
| UniProt_GCRP | UniProtAcc | H2FLH4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 28 Nov 2011 09:42:34 | WBPerson4025 | Event | Acquires_merge | WBGene00194781 | ||||
| Acquires_merge | WBGene00194781 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | aqp | ||||||||
| Allele (52) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00000172 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00000173 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00000169 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00000170 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00000171 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00000175 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00000176 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | apq-6 encodes an aquaporin whose expression in Xenopus oocytes increases water permeability five- to seven-fold; AQP-6 is expressed in the cilia and cell bodies of IL1 sensory neurons; AQP-6 is orthologous to human AQP8 (OMIM:603750). | Paper_evidence | WBPaper00029039 | |||||
| WBPaper00030907 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 21 Nov 2011 00:00:00 | ||||||||
| Automated_description | Enables water channel activity. Involved in water transport. Located in neuronal cell body and non-motile cilium. Expressed in IL1 neuron. Is an ortholog of human AQP8 (aquaporin 8). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C32C4.2a | |||||||
| C32C4.2b | |||||||||
| C32C4.2c | |||||||||
| Corresponding_CDS_history | C32C4.2d:wp261 | ||||||||
| Corresponding_transcript | C32C4.2a.1 | ||||||||
| C32C4.2b.1 | |||||||||
| C32C4.2c.1 | |||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf1001157 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00029409 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011472 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041660 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4776 | ||||||||
| Expr1011216 | |||||||||
| Expr1145683 | |||||||||
| Expr2009383 | |||||||||
| Expr2027619 | |||||||||
| Drives_construct | WBCnstr00012236 | ||||||||
| WBCnstr00037686 | |||||||||
| WBCnstr00040527 | |||||||||
| Construct_product | WBCnstr00037686 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (125) | |||||||||
| SAGE_tag | SAGE:gaggaacactcctgctg | Strand | Antisense | ||||||
| SAGE:ccgtctgctatgtggtc | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:ccgtctgcta | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction (44) | |||||||||
| Map_info | Map | V | Position | 2.67018 | Error | 0.002544 | |||
| Positive | Positive_clone | C32C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029039 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
